COG1011


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1011, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description FMN and 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, HAD superfamily (riboflavin biosynthesis)
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG1011 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1349 FBDBKF_08360 46720 47436 1 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB Morganella morganii S1
1 group_1732 FBDBKF_12090 71205 71822 -1 yihX glucose-1-phosphatase Morganella morganii S1
2 group_1349 EHELCC_13165 116289 117005 -1 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB Morganella morganii S2
3 group_1732 EHELCC_14215 62883 63500 1 yihX glucose-1-phosphatase Morganella morganii S2
4 group_1349 NLDBIP_13505 116289 117005 -1 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB Morganella morganii S4
5 group_1732 NLDBIP_15310 66820 67437 1 yihX glucose-1-phosphatase Morganella morganii S4
6 group_1349 LHKJJB_13050 45438 46154 1 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB Morganella morganii S3
7 group_1732 LHKJJB_15300 71205 71822 -1 yihX glucose-1-phosphatase Morganella morganii S3
8 group_1349 HKOGLL_11980 116289 117005 -1 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB Morganella morganii S5
9 group_1732 HKOGLL_14420 57868 58485 -1 yihX glucose-1-phosphatase Morganella morganii S5
10 group_1349 F4V73_RS09560 11432 12148 1 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB Morganella psychrotolerans
11 group_1732 F4V73_RS14555 142475 143092 1 yihX glucose-1-phosphatase Morganella psychrotolerans
12 group_1732 PMI_RS14210 3154229 3154846 -1 yihX glucose-1-phosphatase Proteus mirabilis HI4320
13 group_1349 PMI_RS16610 3660933 3661649 1 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB Proteus mirabilis HI4320