COG0823


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0823, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Periplasmic component TolB of the Tol biopolymer transport system
Function(s) descr. Intracellular trafficking, secretion, and vesicular transport (U)

Occurence in the database

COG0823 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1506 FBDBKF_09740 44019 45311 -1 tolB Tol-Pal system protein TolB Morganella morganii S1
1 group_1723 FBDBKF_12030 56603 57883 -1 Biopolymer transporter Tol Morganella morganii S1
2 group_1506 EHELCC_04540 235984 237276 -1 tolB Tol-Pal system protein TolB Morganella morganii S2
3 group_1723 EHELCC_14275 76822 78102 1 Biopolymer transporter Tol Morganella morganii S2
4 group_1506 NLDBIP_04540 235780 237072 -1 tolB Tol-Pal system protein TolB Morganella morganii S4
5 group_1723 NLDBIP_15370 80759 82039 1 Biopolymer transporter Tol Morganella morganii S4
6 group_1506 LHKJJB_14090 98306 99598 1 tolB Tol-Pal system protein TolB Morganella morganii S3
7 group_1723 LHKJJB_15240 56603 57883 -1 Biopolymer transporter Tol Morganella morganii S3
8 group_1506 HKOGLL_12445 44800 46092 -1 tolB Tol-Pal system protein TolB Morganella morganii S5
9 group_1723 HKOGLL_14360 43266 44546 -1 Biopolymer transporter Tol Morganella morganii S5
10 group_1506 F4V73_RS00600 127299 128591 1 tolB Tol-Pal system beta propeller repeat protein TolB Morganella psychrotolerans
11 group_1723 F4V73_RS14625 158167 159450 1 DUF3748 domain-containing protein Morganella psychrotolerans
12 group_1506 PMI_RS02870 630568 631863 1 tolB Tol-Pal system beta propeller repeat protein TolB Proteus mirabilis HI4320
13 group_1723 PMI_RS14135 3137621 3138907 -1 DUF3748 domain-containing protein Proteus mirabilis HI4320