Orthogroup:group_1554


Homologs in group_1554

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10070 FBDBKF_10070 Morganella morganii S1 rsfS ribosome silencing factor
EHELCC_04870 EHELCC_04870 Morganella morganii S2 rsfS ribosome silencing factor
NLDBIP_04870 NLDBIP_04870 Morganella morganii S4 rsfS ribosome silencing factor
LHKJJB_13760 LHKJJB_13760 Morganella morganii S3 rsfS ribosome silencing factor
HKOGLL_12775 HKOGLL_12775 Morganella morganii S5 rsfS ribosome silencing factor
F4V73_RS00265 F4V73_RS00265 Morganella psychrotolerans rsfS ribosome silencing factor
PMI_RS02110 PMI_RS02110 Proteus mirabilis HI4320 rsfS ribosome silencing factor

Distribution of group_1554 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1554 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1554

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1554.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rsfS 7

Product

# Product Occurence
1 ribosome silencing factor 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0799 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09710 7 ribosome-associated protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02410 7 Ribosomal silencing factor during starvation

Annotations of the 16 SwissProt hits

Annotation Number of occurrences
Mitochondrial assembly of ribosomal large subunit protein 1 2
Protein Iojap-related, mitochondrial 1
Ribosomal silencing factor RsfS 12
Uncharacterized protein K12H4.2 1

Protein length

Unique protein length 108

Protein length distribution