Homologs in group_1723

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12030 FBDBKF_12030 100.0 Morganella morganii S1 - Biopolymer transporter Tol
EHELCC_14275 EHELCC_14275 100.0 Morganella morganii S2 - Biopolymer transporter Tol
NLDBIP_15370 NLDBIP_15370 100.0 Morganella morganii S4 - Biopolymer transporter Tol
LHKJJB_15240 LHKJJB_15240 100.0 Morganella morganii S3 - Biopolymer transporter Tol
F4V73_RS14625 F4V73_RS14625 79.3 Morganella psychrotolerans - DUF3748 domain-containing protein
PMI_RS14135 PMI_RS14135 60.3 Proteus mirabilis HI4320 - DUF3748 domain-containing protein

Distribution of the homologs in the orthogroup group_1723

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1723

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31455 2.18e-162 466 55 4 420 4 yidR Uncharacterized protein YidR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_14360
Feature type CDS
Gene -
Product Biopolymer transporter Tol
Location 43266 - 44546 (strand: -1)
Length 1281 (nucleotides) / 426 (amino acids)

Contig

Accession ZDB_693
Length 123756 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1723
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF12566 Protein of unknown function (DUF3748)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0823 Intracellular trafficking, secretion, and vesicular transport (U) U Periplasmic component TolB of the Tol biopolymer transport system

Protein Sequence

MNEYQITTTPRHHQLTNINVWTPDSQWLVYDVRPQGSSFIGKTIEKIHVNTTEIREIYRGTAGACVGVVTVSPQLPVRYAFIRGPLNPDPQWQYDFHHRQGVMVSDDVPGVAHNIDAFCITPPYQPGALRGGTHVHVFSPDGEWLSFTYNDHVLHERDPALDLRNVAVAVPLHPVCTGKHHPREYDGEFFCCVVSRTTPAPQPGSDEISRAYEEGWIGEQGYLRADGSRQRRAIAFIGDTRSENDEVIPEIFRLDLPERPEDYAVAGDLPLEGTDSTMPAPPAGVSQTRLTFTHHRRYPGLAKQPRFWLRSSPQGDKIAFLMQDDQGIVQLWTISPLGGEVHQVTSGSDSIESAFSWDSTGRYLAFVRKGLVMVCCAETGVCRAVTAPSAEPVSGDAVVFSPDNSRVAFLRRTNGWQQIWVADTGL

Flanking regions ( +/- flanking 50bp)

ATTACCTGAGGTTATCCGAACTGATGGTATAAAAAGAGAGTATCACTCTAATGAATGAATATCAGATAACAACAACACCCCGTCATCATCAGCTTACTAATATTAATGTATGGACGCCGGATAGCCAATGGCTGGTTTATGATGTCCGCCCTCAGGGGTCTTCGTTTATCGGTAAAACGATAGAAAAAATTCATGTGAATACAACAGAAATCCGTGAAATTTACCGGGGAACCGCCGGGGCCTGTGTGGGTGTGGTGACTGTCAGCCCGCAGTTGCCGGTGCGGTATGCCTTTATCCGCGGGCCGCTGAACCCGGATCCGCAGTGGCAGTATGATTTCCATCACCGTCAGGGGGTGATGGTCAGTGATGATGTGCCGGGTGTTGCACACAATATTGATGCTTTCTGCATTACACCGCCTTATCAGCCCGGCGCTCTGCGCGGCGGTACACATGTGCATGTGTTCAGCCCGGACGGGGAATGGCTGAGTTTCACTTATAACGACCATGTGCTGCATGAGCGGGATCCGGCGCTGGATCTGCGTAATGTGGCGGTGGCGGTTCCGCTGCATCCGGTATGTACCGGGAAACATCACCCGCGTGAATATGACGGGGAGTTTTTCTGCTGTGTGGTCTCGCGGACAACCCCGGCGCCGCAACCCGGCAGTGATGAAATCAGCCGTGCATATGAAGAGGGCTGGATTGGTGAGCAGGGGTATCTGCGGGCTGACGGCTCCCGTCAGCGGCGTGCGATTGCGTTTATCGGGGATACCCGGTCAGAAAACGATGAGGTGATCCCGGAGATTTTCCGTCTCGATCTGCCGGAACGGCCTGAAGATTATGCCGTTGCCGGCGATCTGCCGCTTGAGGGAACCGACAGCACGATGCCTGCTCCGCCGGCCGGTGTCAGCCAGACGCGGCTGACATTTACTCATCATCGCCGGTATCCGGGGCTGGCAAAACAGCCGCGCTTCTGGCTGCGCAGCTCACCGCAGGGCGACAAAATTGCGTTTCTGATGCAGGACGATCAGGGAATTGTTCAGTTGTGGACGATTTCCCCGCTGGGCGGTGAGGTGCATCAGGTCACTTCCGGCAGTGACAGTATTGAATCTGCATTCAGCTGGGACAGCACCGGGCGGTATCTGGCTTTTGTCCGTAAAGGACTGGTCATGGTGTGTTGTGCTGAAACCGGGGTATGCCGCGCGGTGACGGCACCATCGGCAGAACCGGTGTCAGGGGATGCGGTGGTGTTTTCACCAGATAACAGCCGGGTGGCATTTCTGCGCCGCACAAACGGCTGGCAGCAAATCTGGGTGGCAGACACCGGGCTGTAACGGCGGCAGATTACTCCTGCGGCAATGGTGCCGGGGCGTTATGGGCGGTT