Homologs in group_1762

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12030 FBDBKF_12030 79.3 Morganella morganii S1 - Biopolymer transporter Tol
EHELCC_14275 EHELCC_14275 79.3 Morganella morganii S2 - Biopolymer transporter Tol
NLDBIP_15370 NLDBIP_15370 79.3 Morganella morganii S4 - Biopolymer transporter Tol
LHKJJB_15240 LHKJJB_15240 79.3 Morganella morganii S3 - Biopolymer transporter Tol
HKOGLL_14360 HKOGLL_14360 79.3 Morganella morganii S5 - Biopolymer transporter Tol
PMI_RS14135 PMI_RS14135 57.7 Proteus mirabilis HI4320 - DUF3748 domain-containing protein

Distribution of the homologs in the orthogroup group_1762

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1762

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31455 7.2e-161 462 53 4 420 4 yidR Uncharacterized protein YidR Escherichia coli (strain K12)
Q2LRP7 0.000373 46 31 7 131 3 tolB Tol-Pal system protein TolB Syntrophus aciditrophicus (strain SB)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14625
Feature type CDS
Gene -
Product DUF3748 domain-containing protein
Location 158167 - 159450 (strand: 1)
Length 1284 (nucleotides) / 427 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000004
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1762
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12566 Protein of unknown function (DUF3748)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0823 Intracellular trafficking, secretion, and vesicular transport (U) U Periplasmic component TolB of the Tol biopolymer transport system

Protein Sequence

MNEYQITTTPRNHQLTNSNVWTPDSQWLVYDVRPEGASFTGETIEKIHVKTKKITEIYRGTADAHVGVVTVSPQLPVRYAFIRGPQHPDTQWHYDFHHRQGVIVNDDAPGTVHNIDAFCITPPYQPGALRGGTHVHMFSPDGEWLSFTYNDHVLYERDPALDLRNVAVAVPLHPVTVAGHHPREYNGEFFCCVVSKTTPAPLPGSDDISRAYEEGWIGKNGYIKPDGTHQRRAIAFIGDTRADNGDIIPEIFRLDLPESAGDYAKPGASPLEGTEHAMPAPPAGVTQTRLTFTHDRVYPGLAKRPRFWLRSSPQGDKIAFLMQDGQGIAQLWTLSPDGGDMHQITSGAEGIESAFNWDCNGEYLTFIRQGQVVVCCVETGVCRAITAHSEARISGDAVVFSPDNRQVAFLRNTDGWQQIWVADTGVL

Flanking regions ( +/- flanking 50bp)

ATTACCTGTAGTTATCCGAACTGATGGTATAAGAAGAGAGTATCACCCTAATGAATGAATATCAGATAACAACAACACCCCGTAATCATCAGCTTACTAATAGTAATGTATGGACGCCGGATAGCCAATGGCTGGTTTATGATGTCCGCCCGGAAGGGGCTTCTTTTACCGGTGAAACGATAGAAAAAATTCATGTAAAAACAAAAAAAATCACTGAAATTTACCGGGGAACGGCGGATGCTCATGTGGGTGTTGTGACTGTCAGCCCGCAATTACCGGTACGTTACGCGTTTATTCGCGGACCGCAGCATCCGGATACGCAGTGGCACTACGATTTTCATCACCGGCAGGGCGTTATTGTTAATGATGATGCACCCGGCACCGTACATAACATTGATGCTTTCTGTATTACCCCGCCATATCAGCCGGGGGCGCTGCGGGGCGGAACGCACGTTCATATGTTCAGTCCGGACGGAGAATGGCTCAGTTTTACGTATAACGACCATGTTTTGTATGAAAGGGATCCTGCACTGGATTTACGCAATGTGGCCGTCGCCGTTCCGCTGCATCCGGTGACGGTTGCCGGACATCATCCGCGTGAATATAACGGTGAATTTTTCTGCTGTGTGGTATCAAAGACCACTCCGGCTCCTTTACCAGGCAGCGATGATATCAGCCGGGCGTATGAAGAGGGCTGGATTGGTAAGAACGGATATATAAAGCCCGATGGTACACATCAGCGCCGGGCTATCGCGTTTATCGGCGATACGCGGGCTGATAATGGCGATATTATTCCGGAAATTTTCCGCCTTGATCTGCCTGAGTCCGCCGGGGATTATGCAAAGCCCGGAGCGTCTCCTCTTGAGGGTACAGAGCATGCAATGCCTGCACCACCGGCAGGTGTGACTCAGACCCGCCTGACATTTACTCATGACCGTGTATATCCCGGGCTGGCAAAGCGCCCGCGGTTCTGGCTGCGCAGTTCGCCGCAGGGCGATAAAATCGCGTTTCTGATGCAGGACGGGCAGGGTATTGCTCAGCTCTGGACACTCTCTCCTGATGGCGGCGACATGCATCAGATAACCTCCGGGGCAGAGGGTATTGAATCGGCTTTCAACTGGGACTGCAACGGAGAGTATCTGACTTTTATCCGGCAGGGGCAGGTGGTGGTGTGCTGTGTTGAAACAGGAGTGTGCCGGGCAATTACAGCACATTCAGAGGCGCGGATTTCAGGTGATGCGGTCGTGTTTTCCCCGGATAACCGGCAGGTGGCTTTTTTGCGAAACACTGATGGCTGGCAGCAAATCTGGGTGGCAGATACCGGGGTGCTGTAACCGGTACAGTATCAGGGCCCGGTGGCAGAATATTATATTTATCTCTGACA