COG0790

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG0790
Protein list: lists the 32 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description TPR repeat
Function(s) descr. General function prediction only (R)

Occurence in the database

COG0790 is associated with 32 different proteins
The 32 proteins are classified into 8 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3141 FBDBKF_00170 28358 29062 -1 Sel1 repeat family protein Morganella morganii S1
1 group_2629 FBDBKF_03455 97282 97752 1 tPR TPR repeat Morganella morganii S1
2 group_2835 FBDBKF_09450 119183 119521 -1 tPR TPR repeat Morganella morganii S1
3 group_3492 FBDBKF_16840 44831 45874 -1 Ankyrin repeat protein Morganella morganii S1
4 group_382 FBDBKF_19320 17507 22189 -1 tPR TPR repeat Morganella morganii S1
5 group_3141 EHELCC_01375 279806 280510 1 Sel1 repeat family protein Morganella morganii S2
6 group_2629 EHELCC_07080 149351 149821 -1 tPR TPR repeat Morganella morganii S2
7 group_382 EHELCC_07605 264598 269280 -1 tPR TPR repeat Morganella morganii S2
8 group_2835 EHELCC_09960 26583 26921 1 tPR TPR repeat Morganella morganii S2
9 group_3492 EHELCC_10620 167897 168940 1 Ankyrin repeat protein Morganella morganii S2
10 group_3141 NLDBIP_02085 399626 400330 -1 Sel1 repeat family protein Morganella morganii S4
11 group_2629 NLDBIP_07405 149224 149694 -1 tPR TPR repeat Morganella morganii S4
12 group_382 NLDBIP_07930 264471 269153 -1 tPR TPR repeat Morganella morganii S4
13 group_2835 NLDBIP_10305 4854 5192 1 tPR TPR repeat Morganella morganii S4
14 group_3492 NLDBIP_10965 146168 147211 1 Ankyrin repeat protein Morganella morganii S4
15 group_3141 LHKJJB_03600 6867 7571 -1 Sel1 repeat family protein Morganella morganii S3
16 group_2629 LHKJJB_06940 112970 113440 -1 tPR TPR repeat Morganella morganii S3
17 group_382 LHKJJB_07465 228217 232899 -1 tPR TPR repeat Morganella morganii S3
18 group_3492 LHKJJB_10390 44317 45360 -1 Ankyrin repeat protein Morganella morganii S3
19 group_2835 LHKJJB_11050 186336 186674 -1 tPR TPR repeat Morganella morganii S3
20 group_3141 HKOGLL_03445 280011 280715 1 Sel1 repeat family protein Morganella morganii S5
21 group_382 HKOGLL_03465 488 5170 1 tPR TPR repeat Morganella morganii S5
22 group_2629 HKOGLL_03990 119947 120417 1 tPR TPR repeat Morganella morganii S5
23 group_2835 HKOGLL_14110 119637 119975 -1 tPR TPR repeat Morganella morganii S5
24 group_3492 HKOGLL_16555 44326 45369 -1 Ankyrin repeat protein Morganella morganii S5
25 group_4373 F4V73_RS00785 162621 163361 -1 SEL1-like repeat protein Morganella psychrotolerans
26 group_2835 F4V73_RS10530 237577 237906 1 sel1 repeat family protein Morganella psychrotolerans
27 group_2629 F4V73_RS11440 430934 431773 -1 tetratricopeptide repeat protein Morganella psychrotolerans
28 group_4046 F4V73_RS11450 432933 433709 1 tetratricopeptide repeat protein Morganella psychrotolerans
29 group_382 F4V73_RS16880 206154 210824 1 SEL1-like repeat protein Morganella psychrotolerans
30 group_4567 PMI_RS00035 15844 16827 1 SEL1-like repeat protein Proteus mirabilis HI4320
31 group_382 PMI_RS19655 2071796 2072248 -1 hypothetical protein Proteus mirabilis HI4320