Homologs in group_3971

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3971

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3971

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00785
Feature type CDS
Gene -
Product SEL1-like repeat protein
Location 162621 - 163361 (strand: -1)
Length 741 (nucleotides) / 246 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3971
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF08238 Sel1 repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0790 General function prediction only (R) R TPR repeat

Protein Sequence

MKKILLYALLSFNINSYAVSGYPFNYEMLLYSYNSIELKYDSDLPEHAPYPKTRAELISLIKKADNNDLISNYTLFSFFYNPCYLSKRPNDKTNVTEACGPANYYLHKTLSIDSEHVLALYHRGYILENGYGIERDKQKSLHYYDKAYHIGKNKILIACDKLFSKYLNGDDGVDQNIAKAKEYAVIAAKNGSDKYKKYIDNWDYIIFTINTQKEISLCIKQGDNISSCIKNGNNTIKNFKNNYNER

Flanking regions ( +/- flanking 50bp)

TGAAGACATATATCAGTCTGTATATTATATCTAACATCAATGGATAATAAATGAAAAAAATATTACTATATGCATTACTATCCTTTAATATAAATAGTTACGCCGTTTCTGGTTATCCATTTAATTATGAGATGTTACTTTATAGTTATAACTCCATAGAATTAAAATATGACTCTGACTTACCTGAACATGCACCATATCCGAAAACAAGAGCTGAACTTATATCACTTATAAAAAAAGCAGATAACAATGATTTAATTAGTAACTATACTCTGTTTTCTTTTTTTTATAACCCATGTTATTTGTCAAAAAGGCCTAACGATAAAACAAATGTCACTGAAGCCTGTGGGCCGGCAAATTATTATTTGCACAAAACATTATCAATAGACTCTGAACATGTATTAGCATTATACCACCGAGGATATATTCTGGAAAATGGATATGGTATAGAAAGAGACAAACAAAAATCACTTCATTATTATGATAAAGCCTATCACATTGGAAAAAATAAAATACTGATTGCCTGTGATAAATTATTTTCGAAGTACCTGAATGGCGATGATGGTGTTGACCAAAATATCGCCAAAGCAAAAGAGTACGCAGTAATCGCAGCAAAAAATGGTAGTGATAAATATAAAAAATATATTGATAACTGGGACTATATTATATTTACAATTAACACACAAAAAGAAATTAGCCTCTGTATAAAACAGGGTGACAATATCTCTTCCTGCATTAAAAATGGGAATAATACTATCAAAAACTTCAAAAACAATTATAACGAACGGTGATTAAATGAACGAACCAGATCTTATTAATAAGATGGTTTCTTATCAGTAAT