COG0633


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0633, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ferredoxin
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG0633 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_437 FBDBKF_00410 61616 61882 1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella morganii S1
1 group_521 FBDBKF_01110 207157 207492 -1 fdx ISC system 2Fe-2S type ferredoxin Morganella morganii S1
2 group_521 EHELCC_00435 101376 101711 1 fdx ISC system 2Fe-2S type ferredoxin Morganella morganii S2
3 group_437 EHELCC_01135 246986 247252 -1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella morganii S2
4 group_437 NLDBIP_02325 432884 433150 1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella morganii S4
5 group_521 NLDBIP_03025 578425 578760 -1 fdx ISC system 2Fe-2S type ferredoxin Morganella morganii S4
6 group_437 LHKJJB_03840 40125 40391 1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella morganii S3
7 group_521 LHKJJB_04540 185666 186001 -1 fdx ISC system 2Fe-2S type ferredoxin Morganella morganii S3
8 group_521 HKOGLL_02505 101581 101916 1 fdx ISC system 2Fe-2S type ferredoxin Morganella morganii S5
9 group_437 HKOGLL_03205 247191 247457 -1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella morganii S5
10 group_437 F4V73_RS06390 1334079 1334345 1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella psychrotolerans
11 group_521 F4V73_RS07180 1495113 1495451 -1 fdx ISC system 2Fe-2S type ferredoxin Morganella psychrotolerans
12 group_437 PMI_RS08520 1859023 1859301 1 yfaE class I ribonucleotide reductase maintenance protein YfaE Proteus mirabilis HI4320
13 group_521 PMI_RS09155 1997246 1997581 -1 fdx ISC system 2Fe-2S type ferredoxin Proteus mirabilis HI4320