COG0591


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0591, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Na+/proline symporter
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0591 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_224 FBDBKF_00500 79659 81152 -1 putP sodium/proline symporter PutP Morganella morganii S1
1 group_391 FBDBKF_14950 2817 4307 -1 putP Na+/proline symporter Morganella morganii S1
2 group_224 EHELCC_01045 227716 229209 1 putP sodium/proline symporter PutP Morganella morganii S2
3 group_391 EHELCC_11295 80599 82089 1 putP Na+/proline symporter Morganella morganii S2
4 group_224 NLDBIP_02415 450927 452420 -1 putP sodium/proline symporter PutP Morganella morganii S4
5 group_391 NLDBIP_11640 80599 82089 1 putP Na+/proline symporter Morganella morganii S4
6 group_224 LHKJJB_03930 58168 59661 -1 putP sodium/proline symporter PutP Morganella morganii S3
7 group_391 LHKJJB_11500 80599 82089 1 putP Na+/proline symporter Morganella morganii S3
8 group_224 HKOGLL_03115 227921 229414 1 putP sodium/proline symporter PutP Morganella morganii S5
9 group_391 HKOGLL_10110 80599 82089 1 putP Na+/proline symporter Morganella morganii S5
10 group_391 F4V73_RS04925 1046182 1047672 1 sodium:solute symporter family protein Morganella psychrotolerans
11 group_224 F4V73_RS06510 1355290 1356777 -1 putP sodium/proline symporter PutP Morganella psychrotolerans
12 group_224 PMI_RS07890 1725788 1727272 -1 putP sodium/proline symporter PutP Proteus mirabilis HI4320
13 group_391 PMI_RS14715 3262292 3263782 -1 sodium:solute symporter Proteus mirabilis HI4320