COG0425


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0425, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)
Function(s) descr. Translation, ribosomal structure and biogenesis (J)
Coenzyme transport and metabolism (H)
Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG0425 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_773 FBDBKF_03565 117696 117953 -1 tusA sulfurtransferase TusA Morganella morganii S1
1 group_2722 FBDBKF_07415 167458 167685 1 tusA Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis) Morganella morganii S1
2 group_2272 FBDBKF_17475 29012 29257 -1 yedF sulfurtransferase-like selenium metabolism protein YedF Morganella morganii S1
3 group_2722 EHELCC_03555 18501 18728 -1 tusA Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis) Morganella morganii S2
4 group_773 EHELCC_06970 129150 129407 1 tusA sulfurtransferase TusA Morganella morganii S2
5 group_2272 EHELCC_17370 29012 29257 -1 yedF sulfurtransferase-like selenium metabolism protein YedF Morganella morganii S2
6 group_2722 NLDBIP_03555 18297 18524 -1 tusA Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis) Morganella morganii S4
7 group_773 NLDBIP_07295 129023 129280 1 tusA sulfurtransferase TusA Morganella morganii S4
8 group_2272 NLDBIP_17825 13539 13784 1 yedF sulfurtransferase-like selenium metabolism protein YedF Morganella morganii S4
9 group_773 LHKJJB_06830 92769 93026 1 tusA sulfurtransferase TusA Morganella morganii S3
10 group_2722 LHKJJB_09385 18411 18638 -1 tusA Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis) Morganella morganii S3
11 group_2272 LHKJJB_17745 13537 13782 1 yedF sulfurtransferase-like selenium metabolism protein YedF Morganella morganii S3
12 group_773 HKOGLL_04100 140361 140618 -1 tusA sulfurtransferase TusA Morganella morganii S5
13 group_2722 HKOGLL_09590 172414 172641 1 tusA Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis) Morganella morganii S5
14 group_2272 HKOGLL_17755 13537 13782 1 yedF sulfurtransferase-like selenium metabolism protein YedF Morganella morganii S5
15 group_2722 F4V73_RS06490 1351637 1351864 -1 sulfurtransferase TusA family protein Morganella psychrotolerans
16 group_773 F4V73_RS11335 409233 409487 1 tusA sulfurtransferase TusA Morganella psychrotolerans
17 group_2272 F4V73_RS16650 153027 153272 -1 yedF sulfurtransferase-like selenium metabolism protein YedF Morganella psychrotolerans
18 group_2272 PMI_RS00205 64428 64670 1 yedF sulfurtransferase-like selenium metabolism protein YedF Proteus mirabilis HI4320
19 group_773 PMI_RS17900 3932066 3932320 1 tusA sulfurtransferase TusA Proteus mirabilis HI4320