Orthogroup:group_843


Homologs in group_843

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04265 FBDBKF_04265 Morganella morganii S1 pulF Type II secretory pathway, component PulF
EHELCC_05555 EHELCC_05555 Morganella morganii S2 pulF Type II secretory pathway, component PulF
NLDBIP_05875 NLDBIP_05875 Morganella morganii S4 pulF Type II secretory pathway, component PulF
LHKJJB_02755 LHKJJB_02755 Morganella morganii S3 pulF Type II secretory pathway, component PulF
HKOGLL_06230 HKOGLL_06230 Morganella morganii S5 pulF Type II secretory pathway, component PulF
F4V73_RS08710 F4V73_RS08710 Morganella psychrotolerans - type II secretion system F family protein
PMI_RS10110 PMI_RS10110 Proteus mirabilis HI4320 - type II secretion system F family protein

Distribution of group_843 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_843 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_843

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_843.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pulF 5
2 - 2

Product

# Product Occurence
1 Type II secretory pathway, component PulF 5
2 type II secretion system F family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1459 7 NUW Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)
Extracellular structures (W)		 Type II secretory pathway, component PulF

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02505 6 protein transport protein HofC - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00482 7 Type II secretion system (T2SS), protein F

Annotations of the 18 SwissProt hits

Annotation Number of occurrences
ComG operon protein 2 1
ComG operon protein 2 homolog 1
Protein transport protein HofC homolog 2
Putative type II secretion system protein F 1
Type 4 fimbrial assembly protein PilC 1
Type II secretion system protein F 7
Type IV pilin assembly protein PilC 1
Type IV pilus assembly protein PilC 3
Type IV pilus assembly protein TapC 1

Protein length

Min length 368
Max length 399
Mean length (sd) 394.6 (11.7)
Median length 399.0

Protein length distribution