COG0318


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0318, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 23 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming)
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG0318 is associated with 23 different proteins (see tab "Protein list" and "Profile")
The 23 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_242 FBDBKF_02225 135644 137335 1 fadD long-chain-fatty-acid--CoA ligase FadD Morganella morganii S1
1 group_1881 FBDBKF_14065 5156 6547 -1 menE o-succinylbenzoate--CoA ligase Morganella morganii S1
2 group_2031 FBDBKF_15220 54486 56639 1 aas bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase Morganella morganii S1
3 group_242 EHELCC_02695 523464 525155 1 fadD long-chain-fatty-acid--CoA ligase FadD Morganella morganii S2
4 group_1881 EHELCC_08215 110438 111829 1 menE o-succinylbenzoate--CoA ligase Morganella morganii S2
5 group_2031 EHELCC_11025 28267 30420 -1 aas bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase Morganella morganii S2
6 group_242 NLDBIP_00765 154981 156672 -1 fadD long-chain-fatty-acid--CoA ligase FadD Morganella morganii S4
7 group_1881 NLDBIP_08540 110438 111829 1 menE o-succinylbenzoate--CoA ligase Morganella morganii S4
8 group_2031 NLDBIP_11370 28267 30420 -1 aas bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase Morganella morganii S4
9 group_242 LHKJJB_01270 236013 237704 1 fadD long-chain-fatty-acid--CoA ligase FadD Morganella morganii S3
10 group_1881 LHKJJB_05725 145330 146721 -1 menE o-succinylbenzoate--CoA ligase Morganella morganii S3
11 group_2031 LHKJJB_11230 28267 30420 -1 aas bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase Morganella morganii S3
12 group_242 HKOGLL_01310 241524 243215 1 fadD long-chain-fatty-acid--CoA ligase FadD Morganella morganii S5
13 group_1881 HKOGLL_05190 95029 96420 1 menE o-succinylbenzoate--CoA ligase Morganella morganii S5
14 group_2031 HKOGLL_09840 28267 30420 -1 aas bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase Morganella morganii S5
15 group_1881 F4V73_RS02870 607893 609287 1 menE o-succinylbenzoate--CoA ligase Morganella psychrotolerans
16 group_242 F4V73_RS04595 972360 974051 1 fadD long-chain-fatty-acid--CoA ligase FadD Morganella psychrotolerans
17 group_334 F4V73_RS11965 546943 548283 1 AMP-binding protein Morganella psychrotolerans
18 group_2031 F4V73_RS12225 27741 29894 -1 aas bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase Morganella psychrotolerans
19 group_2031 PMI_RS01780 421591 423750 1 aas bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase Proteus mirabilis HI4320
20 group_242 PMI_RS05625 1226739 1228427 1 fadD long-chain-fatty-acid--CoA ligase FadD Proteus mirabilis HI4320
21 group_1881 PMI_RS08545 1863524 1864948 -1 menE o-succinylbenzoate--CoA ligase Proteus mirabilis HI4320
22 group_242 PMI_RS13090 2906571 2908127 1 caiC crotonobetaine/carnitine-CoA ligase Proteus mirabilis HI4320