COG0318
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0318, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 23 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) |
Function(s) descr. |
Lipid transport and metabolism (I) |
Occurence in the database
COG0318 is associated with 23 different proteins (see tab "Protein list" and "Profile") |
The 23 proteins are classified into 4 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_242 |
FBDBKF_02225 |
135644 |
137335 |
1 |
fadD |
long-chain-fatty-acid--CoA ligase FadD |
Morganella morganii S1 |
1 |
group_1881 |
FBDBKF_14065 |
5156 |
6547 |
-1 |
menE |
o-succinylbenzoate--CoA ligase |
Morganella morganii S1 |
2 |
group_2031 |
FBDBKF_15220 |
54486 |
56639 |
1 |
aas |
bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase |
Morganella morganii S1 |
3 |
group_242 |
EHELCC_02695 |
523464 |
525155 |
1 |
fadD |
long-chain-fatty-acid--CoA ligase FadD |
Morganella morganii S2 |
4 |
group_1881 |
EHELCC_08215 |
110438 |
111829 |
1 |
menE |
o-succinylbenzoate--CoA ligase |
Morganella morganii S2 |
5 |
group_2031 |
EHELCC_11025 |
28267 |
30420 |
-1 |
aas |
bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase |
Morganella morganii S2 |
6 |
group_242 |
NLDBIP_00765 |
154981 |
156672 |
-1 |
fadD |
long-chain-fatty-acid--CoA ligase FadD |
Morganella morganii S4 |
7 |
group_1881 |
NLDBIP_08540 |
110438 |
111829 |
1 |
menE |
o-succinylbenzoate--CoA ligase |
Morganella morganii S4 |
8 |
group_2031 |
NLDBIP_11370 |
28267 |
30420 |
-1 |
aas |
bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase |
Morganella morganii S4 |
9 |
group_242 |
LHKJJB_01270 |
236013 |
237704 |
1 |
fadD |
long-chain-fatty-acid--CoA ligase FadD |
Morganella morganii S3 |
10 |
group_1881 |
LHKJJB_05725 |
145330 |
146721 |
-1 |
menE |
o-succinylbenzoate--CoA ligase |
Morganella morganii S3 |
11 |
group_2031 |
LHKJJB_11230 |
28267 |
30420 |
-1 |
aas |
bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase |
Morganella morganii S3 |
12 |
group_242 |
HKOGLL_01310 |
241524 |
243215 |
1 |
fadD |
long-chain-fatty-acid--CoA ligase FadD |
Morganella morganii S5 |
13 |
group_1881 |
HKOGLL_05190 |
95029 |
96420 |
1 |
menE |
o-succinylbenzoate--CoA ligase |
Morganella morganii S5 |
14 |
group_2031 |
HKOGLL_09840 |
28267 |
30420 |
-1 |
aas |
bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase |
Morganella morganii S5 |
15 |
group_1881 |
F4V73_RS02870 |
607893 |
609287 |
1 |
menE |
o-succinylbenzoate--CoA ligase |
Morganella psychrotolerans |
16 |
group_242 |
F4V73_RS04595 |
972360 |
974051 |
1 |
fadD |
long-chain-fatty-acid--CoA ligase FadD |
Morganella psychrotolerans |
17 |
group_334 |
F4V73_RS11965 |
546943 |
548283 |
1 |
|
AMP-binding protein |
Morganella psychrotolerans |
18 |
group_2031 |
F4V73_RS12225 |
27741 |
29894 |
-1 |
aas |
bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase |
Morganella psychrotolerans |
19 |
group_2031 |
PMI_RS01780 |
421591 |
423750 |
1 |
aas |
bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase |
Proteus mirabilis HI4320 |
20 |
group_242 |
PMI_RS05625 |
1226739 |
1228427 |
1 |
fadD |
long-chain-fatty-acid--CoA ligase FadD |
Proteus mirabilis HI4320 |
21 |
group_1881 |
PMI_RS08545 |
1863524 |
1864948 |
-1 |
menE |
o-succinylbenzoate--CoA ligase |
Proteus mirabilis HI4320 |
22 |
group_242 |
PMI_RS13090 |
2906571 |
2908127 |
1 |
caiC |
crotonobetaine/carnitine-CoA ligase |
Proteus mirabilis HI4320 |