Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG0031
Protein list: lists the 21 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.
Description
Description | Cysteine synthase |
---|---|
Function(s) descr. | Amino acid transport and metabolism (E) |
Occurence in the database
COG0031 is associated with 21 different proteins |
The 21 proteins are classified into 3 different orthogroup(s) |
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_221 | FBDBKF_00975 | 177110 | 177991 | -1 | cysM | cysteine synthase CysM | Morganella morganii S1 |
1 | group_1712 | FBDBKF_11605 | 116385 | 117341 | -1 | cysK | cysteine synthase A | Morganella morganii S1 |
2 | group_2965 | FBDBKF_15915 | 33512 | 34552 | -1 | cysK | Cysteine synthase | Morganella morganii S1 |
3 | group_221 | EHELCC_00570 | 130877 | 131758 | 1 | cysM | cysteine synthase CysM | Morganella morganii S2 |
4 | group_1712 | EHELCC_17525 | 14728 | 15684 | -1 | cysK | cysteine synthase A | Morganella morganii S2 |
5 | group_2965 | EHELCC_18515 | 20951 | 21991 | -1 | cysK | Cysteine synthase | Morganella morganii S2 |
6 | group_221 | NLDBIP_02890 | 548378 | 549259 | -1 | cysM | cysteine synthase CysM | Morganella morganii S4 |
7 | group_2965 | NLDBIP_17350 | 20951 | 21991 | -1 | cysK | Cysteine synthase | Morganella morganii S4 |
8 | group_1712 | NLDBIP_18735 | 15475 | 16431 | -1 | cysK | cysteine synthase A | Morganella morganii S4 |
9 | group_221 | LHKJJB_04405 | 155619 | 156500 | -1 | cysM | cysteine synthase CysM | Morganella morganii S3 |
10 | group_2965 | LHKJJB_17310 | 34197 | 35237 | 1 | cysK | Cysteine synthase | Morganella morganii S3 |
11 | group_1712 | LHKJJB_17965 | 14728 | 15684 | -1 | cysK | cysteine synthase A | Morganella morganii S3 |
12 | group_221 | HKOGLL_02640 | 131082 | 131963 | 1 | cysM | cysteine synthase CysM | Morganella morganii S5 |
13 | group_2965 | HKOGLL_17085 | 20951 | 21991 | -1 | cysK | Cysteine synthase | Morganella morganii S5 |
14 | group_1712 | HKOGLL_18685 | 8547 | 9503 | 1 | cysK | cysteine synthase A | Morganella morganii S5 |
15 | group_221 | F4V73_RS07050 | 1463570 | 1464451 | -1 | cysM | cysteine synthase CysM | Morganella psychrotolerans |
16 | group_1712 | F4V73_RS08075 | 1676771 | 1677727 | 1 | cysK | cysteine synthase A | Morganella psychrotolerans |
17 | group_2965 | F4V73_RS16395 | 96007 | 97047 | 1 | PLP-dependent cysteine synthase family protein | Morganella psychrotolerans | |
18 | group_221 | PMI_RS01140 | 281020 | 282036 | 1 | cysteine synthase family protein | Proteus mirabilis HI4320 | |
19 | group_1712 | PMI_RS09015 | 1964475 | 1965428 | 1 | cysK | cysteine synthase A | Proteus mirabilis HI4320 |
20 | group_221 | PMI_RS09035 | 1968537 | 1969418 | -1 | cysM | cysteine synthase CysM | Proteus mirabilis HI4320 |