COG0031


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0031, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Cysteine synthase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0031 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_229 FBDBKF_00975 177110 177991 -1 cysM cysteine synthase CysM Morganella morganii S1
1 group_1669 FBDBKF_11605 116385 117341 -1 cysK cysteine synthase A Morganella morganii S1
2 group_2955 FBDBKF_15915 33512 34552 -1 cysK Cysteine synthase Morganella morganii S1
3 group_229 EHELCC_00570 130877 131758 1 cysM cysteine synthase CysM Morganella morganii S2
4 group_1669 EHELCC_17525 14728 15684 -1 cysK cysteine synthase A Morganella morganii S2
5 group_2955 EHELCC_18515 20951 21991 -1 cysK Cysteine synthase Morganella morganii S2
6 group_229 NLDBIP_02890 548378 549259 -1 cysM cysteine synthase CysM Morganella morganii S4
7 group_2955 NLDBIP_17350 20951 21991 -1 cysK Cysteine synthase Morganella morganii S4
8 group_1669 NLDBIP_18735 15475 16431 -1 cysK cysteine synthase A Morganella morganii S4
9 group_229 LHKJJB_04405 155619 156500 -1 cysM cysteine synthase CysM Morganella morganii S3
10 group_2955 LHKJJB_17310 34197 35237 1 cysK Cysteine synthase Morganella morganii S3
11 group_1669 LHKJJB_17965 14728 15684 -1 cysK cysteine synthase A Morganella morganii S3
12 group_229 HKOGLL_02640 131082 131963 1 cysM cysteine synthase CysM Morganella morganii S5
13 group_2955 HKOGLL_17085 20951 21991 -1 cysK Cysteine synthase Morganella morganii S5
14 group_1669 HKOGLL_18685 8547 9503 1 cysK cysteine synthase A Morganella morganii S5
15 group_229 F4V73_RS07050 1463570 1464451 -1 cysM cysteine synthase CysM Morganella psychrotolerans
16 group_1669 F4V73_RS08075 1676771 1677727 1 cysK cysteine synthase A Morganella psychrotolerans
17 group_2955 F4V73_RS16395 96007 97047 1 PLP-dependent cysteine synthase family protein Morganella psychrotolerans
18 group_229 PMI_RS01140 281020 282036 1 cysteine synthase family protein Proteus mirabilis HI4320
19 group_1669 PMI_RS09015 1964475 1965428 1 cysK cysteine synthase A Proteus mirabilis HI4320
20 group_229 PMI_RS09035 1968537 1969418 -1 cysM cysteine synthase CysM Proteus mirabilis HI4320