Orthogroup:group_221


Homologs in group_221

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00400 FBDBKF_00400 Morganella morganii S1 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha
EHELCC_01145 EHELCC_01145 Morganella morganii S2 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha
NLDBIP_02315 NLDBIP_02315 Morganella morganii S4 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha
LHKJJB_03830 LHKJJB_03830 Morganella morganii S3 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha
HKOGLL_03215 HKOGLL_03215 Morganella morganii S5 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha
F4V73_RS06380 F4V73_RS06380 Morganella psychrotolerans nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha
F4V73_RS17910 F4V73_RS17910 Morganella psychrotolerans nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha
PMI_RS08510 PMI_RS08510 Proteus mirabilis HI4320 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha

Distribution of group_221 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_221 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_221

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_221.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nrdA 8

Product

# Product Occurence
1 class 1a ribonucleoside-diphosphate reductase subunit alpha 8

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0209 8 F Nucleotide transport and metabolism (F) Ribonucleotide reductase alpha subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00317 8 Ribonucleotide reductase, all-alpha domain
PF02867 8 Ribonucleotide reductase, barrel domain
PF03477 8 ATP cone domain

Annotations of the 95 SwissProt hits

Annotation Number of occurrences
Putative ribonucleoside-diphosphate reductase large subunit 1
Ribonucleoside-diphosphate reductase 1 subunit alpha 2
Ribonucleoside-diphosphate reductase 2 subunit alpha 2
Ribonucleoside-diphosphate reductase NrdEB subunit alpha 1
Ribonucleoside-diphosphate reductase large chain 4
Ribonucleoside-diphosphate reductase large chain 1 1
Ribonucleoside-diphosphate reductase large chain 2 1
Ribonucleoside-diphosphate reductase large subunit 44
Ribonucleoside-diphosphate reductase large subunit-like protein 6
Ribonucleoside-diphosphate reductase nrdEB subunit alpha 1
Ribonucleoside-diphosphate reductase subunit alpha 20
Ribonucleoside-diphosphate reductase subunit alpha 1 1
Ribonucleoside-diphosphate reductase subunit alpha 2 1
Vitamin B12-dependent ribonucleoside-diphosphate reductase 4
Vitamin B12-dependent ribonucleotide reductase 5
Vitamin B12-dependent ribonucleotide reductase (Fragment) 1

Protein length

Min length 762
Max length 765
Mean length (sd) 763.8 (0.9)
Median length 764.0

Protein length distribution