Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Morganella morganii S3 and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of Lysine degradation Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the Lysine degradation pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K00022 | 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] | 0 | 0 |
| K00128 | aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] | 1 | 7 |
| K00135 | succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] | 1 | 7 |
| K00137 | aminobutyraldehyde dehydrogenase [EC:1.2.1.19] | 0 | 0 |
| K00149 | aldehyde dehydrogenase family 9 member A1 [EC:1.2.1.47 1.2.1.3] | 0 | 0 |
| K00252 | glutaryl-CoA dehydrogenase [EC:1.3.8.6] | 0 | 0 |
| K00290 | saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7] | 0 | 0 |
| K00293 | saccharopine dehydrogenase (NADP+, L-glutamate forming) [EC:1.5.1.10] | 0 | 0 |
| K00306 | sarcosine oxidase / L-pipecolate oxidase [EC:1.5.3.1 1.5.3.7] | 0 | 0 |
| K00382 | dihydrolipoyl dehydrogenase [EC:1.8.1.4] | 1 | 7 |
| K00468 | lysine 2-monooxygenase [EC:1.13.12.2] | 0 | 0 |
| K00471 | gamma-butyrobetaine dioxygenase [EC:1.14.11.1] | 0 | 0 |
| K00473 | procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4] | 0 | 0 |
| K00474 | trimethyllysine dioxygenase [EC:1.14.11.8] | 0 | 0 |
| K00626 | acetyl-CoA C-acetyltransferase [EC:2.3.1.9] | 2 | 13 |
| K00658 | 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] | 1 | 7 |
| K00824 | D-alanine transaminase [EC:2.6.1.21] | 0 | 1 |
| K00825 | kynurenine/2-aminoadipate aminotransferase [EC:2.6.1.7 2.6.1.39] | 0 | 0 |
| K01034 | acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] | 1 | 6 |
| K01035 | acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] | 1 | 6 |
| K01041 | glutaryl-CoA transferase [EC:2.8.3.-] | 0 | 0 |
| K01506 | 5-aminopentanamidase [EC:3.5.1.30] | 0 | 0 |
| K01582 | lysine decarboxylase [EC:4.1.1.18] | 0 | 0 |
| K01692 | enoyl-CoA hydratase [EC:4.2.1.17] | 0 | 0 |
| K01782 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] | 1 | 7 |
| K01825 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] | 1 | 7 |
| K01843 | lysine 2,3-aminomutase [EC:5.4.3.2] | 0 | 0 |
| K01844 | beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3] | 0 | 0 |
| K04462 | [histone H3]-lysine9 N-methyltransferase (ecotropic virus integration site 1 protein) [EC:2.1.1.367] | 0 | 0 |
| K06101 | [histone H3]-lysine4 N-trimethyltransferase ASH1L [EC:2.1.1.354] | 0 | 0 |
| K07250 | 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] | 0 | 0 |
| K07511 | enoyl-CoA hydratase [EC:4.2.1.17] | 0 | 0 |
| K07514 | enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase [EC:4.2.1.17 1.1.1.35 5.3.3.8] | 0 | 0 |
| K07515 | enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.211] | 0 | 0 |
| K09186 | [histone H3]-lysine4 N-trimethyltransferase MLL1 [EC:2.1.1.354] | 0 | 0 |
| K09187 | [histone H3]-lysine4 N-trimethyltransferase MLL2 [EC:2.1.1.354] | 0 | 0 |
| K09188 | [histone H3]-lysine4 N-trimethyltransferase MLL3 [EC:2.1.1.354] | 0 | 0 |
| K09189 | [histone H3]-lysine4 N-trimethyltransferase MLL5 [EC:2.1.1.354] | 0 | 0 |
| K09251 | putrescine aminotransferase [EC:2.6.1.82] | 0 | 0 |
| K11419 | [histone H3]-lysine9 N-trimethyltransferase SUV39H [EC:2.1.1.355] | 0 | 0 |
| K11420 | [histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355] | 0 | 0 |
| K11421 | [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:2.1.1.366] | 0 | 0 |
| K11422 | [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] | 0 | 0 |
| K11423 | [histone H3]-lysine36 N-trimethyltransferase [EC:2.1.1.359] | 0 | 0 |
| K11424 | [histone H3]-lysine36 N-dimethyltransferase NSD2 [EC:2.1.1.357] | 0 | 0 |
| K11425 | [histone H3]-lysine4 N-dimethyltransferase / [histone H3]-lysine27 N-dimethyltransferase [EC:2.1.1.370 2.1.1.371] | 0 | 0 |
| K11426 | [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] | 0 | 0 |
| K11427 | [histone H3]-lysine79 N-trimethyltransferase [EC:2.1.1.360] | 0 | 0 |
| K11428 | [histone H4]-lysine20 N-methyltransferase SETD8 [EC:2.1.1.361] | 0 | 0 |
| K11429 | [histone H4]-N-methyl-L-lysine20 N-methyltransferase [EC:2.1.1.362] | 0 | 0 |
| K11430 | [histone H3]-lysine27 N-trimethyltransferase EZH2 [EC:2.1.1.356] | 0 | 0 |
| K11431 | [histone H3]-lysine4 N-methyltransferase [EC:2.1.1.364] | 0 | 0 |
| K11432 | [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355] | 0 | 0 |
| K11433 | [histone H3]-lysine36 N-dimethyltransferase SETMAR [EC:2.1.1.357] | 0 | 0 |
| K11703 | collagen beta-1,O-galactosyltransferase [EC:2.4.1.50] | 0 | 0 |
| K13609 | delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] | 0 | 0 |
| K13645 | procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [EC:1.14.11.4] | 0 | 0 |
| K13646 | lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:1.14.11.4 2.4.1.50 2.4.1.66] | 0 | 0 |
| K13647 | procollagen-lysine,2-oxoglutarate 5-dioxygenase, invertebrate [EC:1.14.11.4] | 0 | 0 |
| K14085 | aldehyde dehydrogenase family 7 member A1 [EC:1.2.1.31 1.2.1.8 1.2.1.3] | 0 | 0 |
| K14157 | alpha-aminoadipic semialdehyde synthase [EC:1.5.1.8 1.5.1.9] | 0 | 0 |
| K14268 | 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] | 0 | 0 |
| K14959 | [histone H3]-lysine4 N-trimethyltransferase MLL4 [EC:2.1.1.354] | 0 | 0 |
| K15588 | [histone H3]-lysine36 N-dimethyltransferase NSD1 [EC:2.1.1.357] | 0 | 0 |
| K15736 | (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] | 0 | 1 |
| K15737 | glutarate dioxygenase [EC:1.14.11.64] | 0 | 0 |
| K15791 | 2-oxoadipate dehydrogenase E1 component [EC:1.2.4.-] | 0 | 0 |
| K17451 | [histone H3]-lysine27 N-trimethyltransferase EZH1 [EC:2.1.1.356] | 0 | 0 |
| K18011 | beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3] | 0 | 0 |
| K18012 | L-erythro-3,5-diaminohexanoate dehydrogenase [EC:1.4.1.11] | 0 | 0 |
| K18013 | 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] | 0 | 0 |
| K18014 | 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14] | 0 | 0 |
| K18201 | hydroxylysine kinase [EC:2.7.1.81] | 0 | 0 |
| K18202 | 5-phosphonooxy-L-lysine phospho-lyase [EC:4.2.3.134] | 0 | 0 |
| K18494 | [histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:2.1.1.355] | 0 | 0 |
| K18804 | [cytochrome c]-lysine N-methyltransferase [EC:2.1.1.59] | 0 | 0 |
| K18826 | calmodulin-lysine N-methyltransferase [EC:2.1.1.60] | 0 | 0 |
| K18854 | acetyl-CoA:lysine N6-acetyltransferase [EC:2.3.1.306] | 0 | 0 |
| K19743 | 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] | 0 | 0 |
| K20795 | [histone H4]-lysine20 N-methyltransferase PRDM6 [EC:2.1.1.361] | 0 | 0 |
| K20796 | [histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:2.1.1.354] | 0 | 0 |
| K21672 | 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26] | 0 | 0 |
| K22410 | [histone H3]-lysine9 N-methyltransferase [EC:2.1.1.367] | 0 | 0 |
| K22748 | [histone H3]-lysine4 N-trimethyltransferase ATXR3 [EC:2.1.1.354] | 0 | 0 |
| K23385 | D-ornithine/D-lysine decarboxylase [EC:4.1.1.116] | 0 | 0 |
| K23700 | [histone H3]-lysine36 N-trimethyltransferase [EC:2.1.1.359] | 0 | 0 |
| K24034 | spermidine synthase / saccharopine dehydrogenase (NADP+, L-glutamate-forming) [EC:2.5.1.16 1.5.1.10] | 0 | 0 |
| K24405 | [histone H3]-lysine9 N-dimethyltransferase [EC:2.1.1.368] | 0 | 0 |
| K24406 | [histone H3]-lysine27 N-methyltransferase [EC:2.1.1.369] | 0 | 0 |
| K24407 | [histone H4]-lysine20 N-trimethyltransferase [EC:2.1.1.372] | 0 | 0 |
| K25316 | amino-acid racemase [EC:5.1.1.10] | 0 | 0 |
| K25317 | amino-acid racemase [EC:5.1.1.10] | 0 | 1 |
| K25986 | 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] | 0 | 0 |
| K26061 | L-aminoadipate-semialdehyde dehydrogenase | 0 | 0 |
| K26062 | 2-aminoadipate transaminase [EC:2.6.1.39] | 0 | 0 |
| K26063 | (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] | 0 | 0 |
| K26064 | D-lysine oxidase | 0 | 0 |
| K26065 | L-pipecolate oxidase | 0 | 0 |