Orthogroup:group_987



Homologs in group_987

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05455 FBDBKF_05455 Morganella morganii S1 hypF carbamoyltransferase HypF
EHELCC_12135 EHELCC_12135 Morganella morganii S2 hypF carbamoyltransferase HypF
NLDBIP_12475 NLDBIP_12475 Morganella morganii S4 hypF carbamoyltransferase HypF
LHKJJB_12335 LHKJJB_12335 Morganella morganii S3 hypF carbamoyltransferase HypF
HKOGLL_10950 HKOGLL_10950 Morganella morganii S5 hypF carbamoyltransferase HypF
F4V73_RS03840 F4V73_RS03840 Morganella psychrotolerans hypF carbamoyltransferase HypF
PMI_RS07305 PMI_RS07305 Proteus mirabilis HI4320 hypF carbamoyltransferase HypF

Distribution of group_987 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_987 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_987

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_987.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hypF 7

Product

# Product Occurence
1 carbamoyltransferase HypF 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0068 7 O Posttranslational modification, protein turnover, chaperones (O) Hydrogenase maturation factor HypF (carbamoyltransferase)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04656 7 hydrogenase maturation protein HypF - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00708 7 Acylphosphatase
PF01300 7 Telomere recombination
PF07503 7 HypF finger
PF17788 7 HypF Kae1-like domain
PF22521 7 Carbamoyltransferase, Kae1-like Domain, second subdomain

Annotations of the 62 SwissProt hits

Annotation Number of occurrences
Acylphosphatase 24
Acylphosphatase 2 1
Carbamoyltransferase HypF 6
Carbamoyltransferase HypF homolog 1
Carbamoyltransferase HypF2 1
Probable carbamoyltransferase HypF 1
Threonylcarbamoyl-AMP synthase 28

Protein length

Min length 764
Max length 766
Mean length (sd) 764.6 (1.0)
Median length 764.0

Protein length distribution