COG0114


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0114, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fumarate hydratase class II
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG0114 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_920 FBDBKF_04990 1882 3276 -1 fumC class II fumarate hydratase Morganella morganii S1
1 group_920 EHELCC_12600 178218 179612 1 fumC class II fumarate hydratase Morganella morganii S2
2 group_920 NLDBIP_12940 178173 179567 1 fumC class II fumarate hydratase Morganella morganii S4
3 group_920 LHKJJB_12800 178218 179612 1 fumC class II fumarate hydratase Morganella morganii S3
4 group_920 HKOGLL_11415 178218 179612 1 fumC class II fumarate hydratase Morganella morganii S5
5 group_920 F4V73_RS05435 1154543 1155937 -1 fumC class II fumarate hydratase Morganella psychrotolerans
6 group_920 PMI_RS06255 1369935 1371332 -1 fumC class II fumarate hydratase Proteus mirabilis HI4320