Orthogroup:group_938


Homologs in group_938

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05095 FBDBKF_05095 Morganella morganii S1 ribA GTP cyclohydrolase II
EHELCC_12495 EHELCC_12495 Morganella morganii S2 ribA GTP cyclohydrolase II
NLDBIP_12835 NLDBIP_12835 Morganella morganii S4 ribA GTP cyclohydrolase II
LHKJJB_12695 LHKJJB_12695 Morganella morganii S3 ribA GTP cyclohydrolase II
HKOGLL_11310 HKOGLL_11310 Morganella morganii S5 ribA GTP cyclohydrolase II
F4V73_RS05550 F4V73_RS05550 Morganella psychrotolerans ribA GTP cyclohydrolase II
PMI_RS06355 PMI_RS06355 Proteus mirabilis HI4320 ribA GTP cyclohydrolase II

Distribution of group_938 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_938 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_938

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_938.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ribA 7

Product

# Product Occurence
1 GTP cyclohydrolase II 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0807 7 H Coenzyme transport and metabolism (H) GTP cyclohydrolase II

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00925 7 GTP cyclohydrolase II

Annotations of the 230 SwissProt hits

Annotation Number of occurrences
3,4-dihydroxy-2-butanone 4-phosphate synthase 6
Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 1
GTP cyclohydrolase-2 133
GTP cyclohydrolase-2 (Fragment) 1
Monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 1
Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic 1
Probable GTP cyclohydrolase-2 1
Probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 1
Probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 1
Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic 1
Putative GTP cyclohydrolase URC1 1
Riboflavin biosynthesis protein RibBA 80
Riboflavin biosynthesis protein VVA0006 1
Uracil-regulated protein 1 1

Protein length

Min length 199
Max length 206
Mean length (sd) 204.4 (2.8)
Median length 206.0

Protein length distribution