Orthogroup:group_893



Homologs in group_893

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04665 FBDBKF_04665 Morganella morganii S1 emrA Multidrug resistance efflux pump EmrA
EHELCC_05955 EHELCC_05955 Morganella morganii S2 emrA Multidrug resistance efflux pump EmrA
NLDBIP_06275 NLDBIP_06275 Morganella morganii S4 emrA Multidrug resistance efflux pump EmrA
LHKJJB_03155 LHKJJB_03155 Morganella morganii S3 emrA Multidrug resistance efflux pump EmrA
HKOGLL_06630 HKOGLL_06630 Morganella morganii S5 emrA Multidrug resistance efflux pump EmrA
F4V73_RS09130 F4V73_RS09130 Morganella psychrotolerans - HlyD family efflux transporter periplasmic adaptor subunit
PMI_RS05900 PMI_RS05900 Proteus mirabilis HI4320 - biotin/lipoyl-binding protein

Distribution of group_893 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_893 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_893

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_893.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 emrA 5
2 - 2

Product

# Product Occurence
1 Multidrug resistance efflux pump EmrA 5
2 HlyD family efflux transporter periplasmic adaptor subunit 1
3 biotin/lipoyl-binding protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1566 7 V Defense mechanisms (V) Multidrug resistance efflux pump EmrA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01993 7 HlyD family secretion protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13437 7 HlyD family secretion protein
PF13533 7 Biotin-lipoyl like

Annotations of the 116 SwissProt hits

Annotation Number of occurrences
36 kDa antigen 2
Colistin resistance protein EmrA 1
Fatty acid resistance protein FarA 1
Macrolide export protein MacA 4
Membrane fusion protein MtrC 1
Multidrug export protein EmrA 2
Multidrug resistance protein MdtA 43
Multidrug resistance protein MdtN 4
Probable multidrug resistance protein EmrK 1
Putative multidrug resistance protein MdtA 1
UPF0194 membrane protein CKO_02332 1
UPF0194 membrane protein Ent638_1286 1
UPF0194 membrane protein RB0873 1
UPF0194 membrane protein YE2891 1
UPF0194 membrane protein YPA_1093 1
UPF0194 membrane protein YPK_2900 1
UPF0194 membrane protein YPN_2816 1
UPF0194 membrane protein YPTB1212 1
UPF0194 membrane protein YPTS_1292 1
UPF0194 membrane protein YP_0975 1
UPF0194 membrane protein YbhG 42
UPF0194 membrane protein YpsIP31758_2812 1
UPF0194 membrane protein in asrC 5'region (Fragment) 1
Uncharacterized protein YdhJ 1
Uncharacterized protein YhiI 1

Protein length

Unique protein length 357

Protein length distribution