K00605


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K00605, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K00605
KO K00605
Description glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]

KO part of 7 pathways

Glycine, serine and threonine metabolism
Glyoxylate and dicarboxylate metabolism
One carbon pool by folate
Lipoic acid metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Carbon metabolism

KO part of 2 modules

M00532 Other carbohydrate metabolism Photorespiration
M00621 Serine and threonine metabolism Glycine cleavage system

Occurence in the database

K00605 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_257 PMI_RS09965 2160470 2161564 -1 gcvT glycine cleavage system aminomethyltransferase GcvT Proteus mirabilis HI4320
1 group_257 FBDBKF_04140 13616 14710 -1 gcvT glycine cleavage system aminomethyltransferase GcvT Morganella morganii S1
2 group_257 EHELCC_05430 73073 74167 -1 gcvT glycine cleavage system aminomethyltransferase GcvT Morganella morganii S2
3 group_257 NLDBIP_05750 114138 115232 -1 gcvT glycine cleavage system aminomethyltransferase GcvT Morganella morganii S4
4 group_257 LHKJJB_02630 91662 92756 -1 gcvT glycine cleavage system aminomethyltransferase GcvT Morganella morganii S3
5 group_257 HKOGLL_06105 13526 14620 -1 gcvT glycine cleavage system aminomethyltransferase GcvT Morganella morganii S5
6 group_257 F4V73_RS08585 1772945 1774039 -1 gcvT glycine cleavage system aminomethyltransferase GcvT Morganella psychrotolerans