Orthogroup:group_83


Homologs in group_83

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12 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05010 FBDBKF_05010 Morganella morganii S1 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
FBDBKF_07275 FBDBKF_07275 Morganella morganii S1 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
EHELCC_03695 EHELCC_03695 Morganella morganii S2 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
EHELCC_12580 EHELCC_12580 Morganella morganii S2 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
NLDBIP_03695 NLDBIP_03695 Morganella morganii S4 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
NLDBIP_12920 NLDBIP_12920 Morganella morganii S4 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
LHKJJB_09525 LHKJJB_09525 Morganella morganii S3 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
LHKJJB_12780 LHKJJB_12780 Morganella morganii S3 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
HKOGLL_09450 HKOGLL_09450 Morganella morganii S5 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
HKOGLL_11395 HKOGLL_11395 Morganella morganii S5 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
F4V73_RS01460 F4V73_RS01460 Morganella psychrotolerans - TPM domain-containing protein
PMI_RS13025 PMI_RS13025 Proteus mirabilis HI4320 - TPM domain-containing protein

Distribution of group_83 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_83 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_83

Orthogroup content: 12 members

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This page summarizes the annotation of all members of the orthologous group group_83.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ygcG 10
2 - 2

Product

# Product Occurence
1 Uncharacterized membrane protein YgcG, contains a TPM-fold domain 10
2 TPM domain-containing protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1512 12 S Function unknown (S) Uncharacterized membrane protein YgcG, contains a TPM-fold domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06872 12 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04536 12 TPM domain

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
UPF0603 protein YgcG 1

Protein length

Min length 380
Max length 409
Mean length (sd) 395.2 (14.3)
Median length 399.0

Protein length distribution