Homologs in group_83

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11 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05010 FBDBKF_05010 100.0 Morganella morganii S1 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
FBDBKF_07275 FBDBKF_07275 35.7 Morganella morganii S1 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
EHELCC_03695 EHELCC_03695 35.7 Morganella morganii S2 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
EHELCC_12580 EHELCC_12580 100.0 Morganella morganii S2 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
NLDBIP_03695 NLDBIP_03695 35.7 Morganella morganii S4 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
LHKJJB_09525 LHKJJB_09525 35.7 Morganella morganii S3 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
LHKJJB_12780 LHKJJB_12780 100.0 Morganella morganii S3 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
HKOGLL_09450 HKOGLL_09450 35.7 Morganella morganii S5 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
HKOGLL_11395 HKOGLL_11395 100.0 Morganella morganii S5 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
F4V73_RS01460 F4V73_RS01460 36.7 Morganella psychrotolerans - TPM domain-containing protein
PMI_RS13025 PMI_RS13025 50.1 Proteus mirabilis HI4320 - TPM domain-containing protein

Distribution of the homologs in the orthogroup group_83

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_83

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P55140 4.48e-22 98 36 2 145 3 ygcG UPF0603 protein YgcG Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_12920
Feature type CDS
Gene ygcG
Product Uncharacterized membrane protein YgcG, contains a TPM-fold domain
Location 172854 - 173996 (strand: 1)
Length 1143 (nucleotides) / 380 (amino acids)
In genomic island -

Contig

Accession ZDB_527
Length 181446 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_83
Orthogroup size 12
N. genomes 7

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Genomic region

Domains

PF04536 TPM domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1512 Function unknown (S) S Uncharacterized membrane protein YgcG, contains a TPM-fold domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06872 uncharacterized protein - -

Protein Sequence

MSRVMAGCLILLFVSFFARADVQALPELKRERVIDSAGLLTGSQLTQLNRQLIEYELSRNDGSQFVVFIVPSTGGESIETFAHRAFNTWKIGRKGQNNGLLLVVAVNDRNLRFEVGYGLEGILPDVSAGRIIRQRITPEFKKGHYFTGIEAGVTDAIDIISGNEPEYIKSETSGTEALKLKRLTIIYLLTFITVYLWSLFIGSPRRKKRIEKQVLNDIEYLREEYAKSKNKKKRQPERIIRLAQKRLTAFLQYKYIYPTPLGHTVNVLFYSVLIFIMTRVLIDGDPDPDALFISIMMLIFLNVFGSLFICYLLYTLIPEYLTQEAEIRKLTGVIAGTGGGYSSGSDSGSYSSSSGGSSGSSGSSGGGGGSSGGGGASGSW

Flanking regions ( +/- flanking 50bp)

ATGGCGGCGCGCTATGCGCGGCAGGGGAAAGAACATTCACAGGAGTAATGATGAGCAGGGTTATGGCAGGATGCCTGATACTTCTTTTTGTCAGTTTTTTTGCCCGTGCGGATGTGCAGGCTCTGCCGGAACTGAAACGGGAACGGGTTATTGACAGCGCCGGTCTTCTGACCGGCTCTCAATTAACACAGCTTAACCGGCAACTCATTGAGTATGAACTGAGCCGCAATGACGGCAGCCAGTTCGTGGTGTTTATTGTGCCGTCAACCGGCGGAGAAAGTATTGAGACATTTGCGCACCGTGCGTTTAATACATGGAAGATCGGCCGCAAAGGTCAGAATAACGGACTGTTGCTGGTCGTGGCGGTGAATGACCGTAATTTGCGTTTTGAGGTCGGCTATGGACTGGAAGGTATTCTGCCGGATGTCTCCGCAGGCCGTATTATCCGTCAGCGTATCACCCCTGAATTTAAAAAAGGCCATTATTTTACCGGAATTGAAGCGGGTGTGACCGATGCCATTGATATTATCAGCGGAAATGAACCGGAATATATCAAATCAGAGACATCCGGAACAGAAGCATTAAAACTCAAACGACTGACGATTATTTATCTTCTGACCTTTATTACGGTGTATCTCTGGTCATTATTTATTGGTTCTCCCCGCCGTAAGAAAAGGATAGAAAAGCAGGTTCTTAACGATATTGAATATCTGAGAGAAGAATACGCGAAATCCAAAAACAAGAAAAAACGTCAGCCTGAACGGATAATCCGCCTTGCGCAGAAACGCCTGACGGCATTTTTGCAGTATAAGTATATTTATCCGACACCGCTCGGCCATACTGTGAACGTATTATTTTATTCAGTTCTGATTTTTATAATGACACGGGTTCTGATAGACGGAGATCCTGATCCTGATGCGTTGTTCATCAGTATAATGATGCTCATTTTTCTTAATGTATTTGGCTCACTATTTATTTGTTATTTATTATATACATTAATTCCGGAATATCTTACTCAGGAAGCGGAAATACGGAAATTAACCGGTGTCATAGCAGGTACAGGAGGCGGGTATTCATCCGGTTCTGACAGTGGCAGTTACAGCAGCAGTTCCGGCGGTAGTTCCGGAAGCAGCGGATCGTCCGGTGGCGGAGGCGGCAGCAGTGGTGGTGGCGGTGCTTCCGGGAGCTGGTAAAAGACATAAAAAAGCCGTGACAAAGAATGCCACGGCTTTTTTTTACCGGA