Homologs in group_83

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11 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05010 FBDBKF_05010 35.7 Morganella morganii S1 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
FBDBKF_07275 FBDBKF_07275 100.0 Morganella morganii S1 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
EHELCC_03695 EHELCC_03695 100.0 Morganella morganii S2 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
EHELCC_12580 EHELCC_12580 35.7 Morganella morganii S2 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
NLDBIP_03695 NLDBIP_03695 100.0 Morganella morganii S4 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
NLDBIP_12920 NLDBIP_12920 35.7 Morganella morganii S4 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
LHKJJB_09525 LHKJJB_09525 100.0 Morganella morganii S3 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
LHKJJB_12780 LHKJJB_12780 35.7 Morganella morganii S3 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
HKOGLL_11395 HKOGLL_11395 35.7 Morganella morganii S5 ygcG Uncharacterized membrane protein YgcG, contains a TPM-fold domain
F4V73_RS01460 F4V73_RS01460 76.7 Morganella psychrotolerans - TPM domain-containing protein
PMI_RS13025 PMI_RS13025 36.4 Proteus mirabilis HI4320 - TPM domain-containing protein

Distribution of the homologs in the orthogroup group_83

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_83

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P55140 7.41e-31 122 41 3 162 3 ygcG UPF0603 protein YgcG Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_09450
Feature type CDS
Gene ygcG
Product Uncharacterized membrane protein YgcG, contains a TPM-fold domain
Location 141195 - 142424 (strand: 1)
Length 1230 (nucleotides) / 409 (amino acids)
In genomic island -

Contig

Accession ZDB_686
Length 191111 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_83
Orthogroup size 12
N. genomes 7

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Genomic region

Domains

PF04536 TPM domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1512 Function unknown (S) S Uncharacterized membrane protein YgcG, contains a TPM-fold domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06872 uncharacterized protein - -

Protein Sequence

MRNEINRYSRWLQGIFSLFLLLFAVTAFAQTETFPRMQGSVTDTAGLLTAGERSSIEHKLNALREQTGTQIAVLTVNTTGSRDIESYAEKVFNQWRLGRINIDDGILLLVASDDRAMRIEVGYGLEGAVSDAVANRILKDYFIPNFKMGNYACGINDTVDALIARVRNEPLPPVTTPAFFIAKQAGPVGWIDIVLGAVLAASAYLWGAFLYGMVKRFKLKAAIPIAIILYLTWYAGGFNNPAGNGIHFGEDFLCTELPRWSQFLFLQILPFWLVIVLTFTMFIAAFFLFLLTLGGLYWILTKIVRPQKLRVSICVGFLFGGFAFIFGLLFSEGSLAAGVVAGVGFGMFVGIGHYFGFVTVGGGGGSGSGRGGRGGGSSGGGYSGGSRSSSRSSSGGGGRSGGGGASGRW

Flanking regions ( +/- flanking 50bp)

CGGTAAACTCAGGCCAATGACGACCTGTATATAAAAGAAAGGATTTCGTGATGAGAAATGAAATAAACCGGTACAGTCGCTGGTTACAGGGGATATTTTCCCTGTTTTTGCTGCTTTTTGCTGTGACGGCATTTGCTCAGACGGAGACATTTCCCCGTATGCAGGGATCGGTCACCGATACCGCCGGATTGCTGACCGCCGGTGAGCGCAGCAGTATTGAGCATAAACTGAATGCACTGCGCGAGCAGACCGGTACGCAGATTGCGGTACTGACGGTGAACACTACCGGCTCGCGTGATATTGAAAGTTATGCGGAAAAAGTCTTTAACCAGTGGCGATTAGGTCGTATCAATATTGATGACGGTATTTTATTGCTGGTGGCGTCAGATGATCGCGCGATGCGGATTGAGGTCGGATACGGGCTGGAAGGAGCGGTGAGTGATGCGGTGGCAAACCGTATTCTCAAGGATTATTTCATTCCGAATTTTAAAATGGGAAATTATGCCTGTGGTATTAATGATACCGTCGATGCGCTGATTGCCAGAGTCCGCAATGAACCACTGCCACCGGTTACCACTCCGGCATTCTTTATTGCCAAACAGGCAGGGCCCGTCGGCTGGATTGATATTGTGCTTGGTGCGGTACTGGCCGCGAGTGCATATCTGTGGGGCGCTTTCCTGTATGGCATGGTGAAACGCTTTAAACTGAAAGCGGCAATTCCGATCGCCATTATTCTTTATCTGACCTGGTACGCCGGCGGCTTTAATAATCCGGCCGGAAACGGTATTCATTTCGGGGAAGATTTTCTCTGCACAGAATTACCGCGCTGGAGTCAGTTCCTGTTCCTGCAGATTCTGCCGTTCTGGCTGGTGATAGTGTTGACATTCACCATGTTTATCGCGGCCTTCTTCTTATTCCTGCTTACGCTCGGCGGATTGTACTGGATATTGACGAAAATTGTCCGGCCTCAGAAGCTGCGGGTTTCAATCTGTGTTGGTTTTCTGTTCGGCGGATTTGCTTTTATTTTCGGATTACTGTTTTCAGAGGGGAGTCTGGCCGCCGGTGTGGTGGCGGGAGTGGGATTCGGCATGTTTGTCGGGATCGGGCACTATTTCGGTTTTGTTACTGTCGGCGGCGGAGGCGGCAGTGGTTCAGGGCGCGGCGGCCGTGGCGGGGGCAGCAGCGGCGGTGGTTACAGCGGGGGCAGCCGGAGCAGCAGCCGATCCTCATCCGGAGGCGGAGGACGCAGCGGTGGCGGCGGGGCATCCGGTCGCTGGTGATCTGATAATAAATGACGCACATTCTTTGTGCGTCATTTACTGCGTAAAAA