Orthogroup:group_762


Homologs in group_762

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03455 FBDBKF_03455 Morganella morganii S1 tPR TPR repeat
EHELCC_07080 EHELCC_07080 Morganella morganii S2 tPR TPR repeat
NLDBIP_07405 NLDBIP_07405 Morganella morganii S4 tPR TPR repeat
LHKJJB_06940 LHKJJB_06940 Morganella morganii S3 tPR TPR repeat
HKOGLL_03990 HKOGLL_03990 Morganella morganii S5 tPR TPR repeat
F4V73_RS11440 F4V73_RS11440 Morganella psychrotolerans - tetratricopeptide repeat protein
F4V73_RS11450 F4V73_RS11450 Morganella psychrotolerans - tetratricopeptide repeat protein

Distribution of group_762 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_762 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_762

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_762.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tPR 5
2 - 2

Product

# Product Occurence
1 TPR repeat 5
2 tetratricopeptide repeat protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0790 7 R General function prediction only (R) TPR repeat

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07126 7 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF08238 7 Sel1 repeat

Annotations of the 45 SwissProt hits

Annotation Number of occurrences
Beta-lactamase HcpA 2
Chitin synthase regulator 2 1
Chitin synthase regulator SKT5 2
Chitin synthase regulatory factor 3 1
Cytochrome c oxidase assembly factor 7A 1
DAP3-binding cell death enhancer 1 2
ERAD-associated E3 ubiquitin-protein ligase component HRD3 1
ERAD-associated E3 ubiquitin-protein ligase component HRD3A 1
ERAD-associated E3 ubiquitin-protein ligase component HRD3B 1
F-box protein At1g70590 1
LRP2-binding protein 3
Localization factor PodJL 2
Protein sel-1 homolog 1 4
Protein sel-1 homolog 2 3
Protein sel-1 homolog 3 2
Putative ERAD-associated E3 ubiquitin-protein ligase component 1
Putative beta-lactamase HcpC 2
Putative beta-lactamase HcpD 2
Putative beta-lactamase HcpE 2
Putative sel1-like repeat-containing protein L18 1
Putative sel1-like repeat-containing protein L21 1
Putative sel1-like repeat-containing protein R815 1
Secretory immunoglobulin A-binding protein EsiB 1
Sel1-repeat-containing protein YbeQ 1
Sel1-repeat-containing protein YbeT 1
Sel1-repeat-containing protein YjcO 1
Uncharacterized protein HI_1625 1
Uncharacterized protein NMB1327 1
Uncharacterized protein YjcO 2

Protein length

Min length 156
Max length 279
Mean length (sd) 188.1 (55.2)
Median length 156.0

Protein length distribution