Orthogroup:group_733


Homologs in group_733

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03240 FBDBKF_03240 Morganella morganii S1 lptA lipopolysaccharide ABC transporter substrate-binding protein LptA
EHELCC_07295 EHELCC_07295 Morganella morganii S2 lptA lipopolysaccharide ABC transporter substrate-binding protein LptA
NLDBIP_07620 NLDBIP_07620 Morganella morganii S4 lptA lipopolysaccharide ABC transporter substrate-binding protein LptA
LHKJJB_07155 LHKJJB_07155 Morganella morganii S3 lptA lipopolysaccharide ABC transporter substrate-binding protein LptA
HKOGLL_03775 HKOGLL_03775 Morganella morganii S5 lptA lipopolysaccharide ABC transporter substrate-binding protein LptA
F4V73_RS11680 F4V73_RS11680 Morganella psychrotolerans lptA lipopolysaccharide ABC transporter substrate-binding protein LptA
PMI_RS18160 PMI_RS18160 Proteus mirabilis HI4320 lptA lipopolysaccharide ABC transporter substrate-binding protein LptA

Distribution of group_733 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_733 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_733

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_733.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lptA 7

Product

# Product Occurence
1 lipopolysaccharide ABC transporter substrate-binding protein LptA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1934 7 M Cell wall/membrane/envelope biogenesis (M) Lipopolysaccharide export system protein LptA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09774 7 lipopolysaccharide export system protein LptA - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03968 7 LptA/(LptD N-terminal domain) LPS transport protein

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Lipopolysaccharide export system protein LptA 5
Lipopolysaccharide export system protein LptH 1

Protein length

Min length 177
Max length 178
Mean length (sd) 177.9 (0.4)
Median length 178.0

Protein length distribution