Homologs in group_661

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_02815 EHELCC_02815 100.0 Morganella morganii S2 ydbH YdbH family protein
NLDBIP_00645 NLDBIP_00645 100.0 Morganella morganii S4 ydbH YdbH family protein
LHKJJB_01390 LHKJJB_01390 100.0 Morganella morganii S3 ydbH YdbH family protein
HKOGLL_01430 HKOGLL_01430 100.0 Morganella morganii S5 ydbH YdbH family protein
F4V73_RS04725 F4V73_RS04725 74.7 Morganella psychrotolerans - YdbH family protein
PMI_RS05705 PMI_RS05705 45.4 Proteus mirabilis HI4320 - YdbH family protein

Distribution of the homologs in the orthogroup group_661

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_661

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P52645 0 640 40 8 844 4 ydbH Uncharacterized protein YdbH Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_02345
Feature type CDS
Gene ydbH
Product YdbH family protein
Location 158525 - 161134 (strand: 1)
Length 2610 (nucleotides) / 869 (amino acids)

Contig

Accession contig_2
Length 292399 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_661
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF11739 Dicarboxylate transport

Protein Sequence

MKKLLKVLVVLLVLLMIILPAAWLTIPRWLPAVVKSSLPDGVTLSLSQPKIRAGGLYIEEAVLRSNECQLAGGEKLSLHYQRGGRWIIDAGSLTGDADCFQKLPSGSEETDTTPVDIGALLSQLPPVTLTADNVIPAPWQMYQGKLSLTTAPGRGQQLSYQGENIQAELAVDPALNLTLSQLDATIGDEKFALSGALTLPLNTAELPDKGRLQAEITTTYRPQPLMAAFDWQGRQGVLTLSETDPRTVLLNIPWEATAESILIKSGEWRWDEWEQPLRGTISAELKNWLSSPADMLLGARISVTTQGVRGKGTVVLQLPETPLSLTEFDIPFELAGQVNHNDMWAAGRVPAVLTGTFADPVIRLRSGALVRARGQLSPDFLVEELRLPLAGTSLSQQGISGPLDAIVTVNNLELGRYRFQMKGQAREFLPDNGRWYWQIWGKGRMKPLNADWTFSGAGSWLDEEIRIRKLNTGFNGIRYGMMSMDAPALTLLSPLIWTRVDGQEKLSGKVQLTTRKIRLDNSYLPSATFGMTLDGRDPRDFSVKGTLSAGKNIGPIHYWSRWDGVRLRGEARWPEQDMRAFQTLIPADLGITLRNGVFYAQAAYSAAPGQGFVAGGHWVVKQAGMWLKDGEVSGVDFVLPWRLADSRWQLGSKTPVMLRIARVENLFEVTDIKADLQGYYPYDDTYPLELSGVSLDILGGQVTMPSLTIPQKTAAVIKLDKLNTGPLINTLKVTQFALEGSISGELPFYIDNPQWIVHNGWVENDEPLTLNLDNQFVESVSENNISAGTAINWLDYLVMKRVRTDVNLTNLGVLTMSSVVSGYNPVLDARRAVNLNYRHEENVFQLWRSLRFGSNLEAWLEKSISQNQE

Flanking regions ( +/- flanking 50bp)

TAACGCTTAGTTGATGTATCTGTAACCGGGGAACTGCACCTCTGAGGTCTATGAAAAAATTACTGAAAGTGCTGGTGGTACTGCTTGTTCTGCTGATGATTATCCTCCCGGCAGCCTGGCTGACAATTCCGCGCTGGCTGCCTGCGGTGGTGAAATCCTCTCTGCCTGATGGTGTTACACTGTCACTTTCTCAGCCAAAAATCCGTGCGGGTGGCCTCTATATAGAAGAAGCGGTTCTCCGCAGTAATGAATGTCAGCTGGCGGGCGGGGAAAAGCTGTCACTTCACTATCAGCGCGGCGGCCGCTGGATTATTGATGCCGGTTCACTGACCGGTGATGCGGACTGCTTTCAGAAATTACCTTCCGGCTCTGAAGAAACAGACACTACACCGGTTGATATCGGCGCACTGTTATCGCAGCTGCCGCCGGTGACGCTGACCGCGGATAACGTTATCCCCGCGCCCTGGCAGATGTATCAGGGAAAACTGAGCCTGACAACCGCACCCGGCCGGGGACAGCAACTGAGTTATCAGGGAGAGAACATTCAGGCGGAGCTGGCGGTTGATCCGGCACTGAACCTGACGTTGTCACAACTGGATGCCACTATCGGTGATGAAAAATTTGCGCTCAGCGGCGCACTGACACTGCCGCTGAATACAGCGGAGCTGCCGGATAAAGGCAGATTACAGGCTGAAATCACAACCACATACCGGCCACAGCCGCTGATGGCTGCCTTTGACTGGCAGGGGCGGCAGGGCGTTCTGACGCTGAGTGAAACTGATCCGCGGACCGTGCTGCTGAATATTCCCTGGGAAGCCACGGCGGAAAGTATCCTGATTAAAAGCGGGGAATGGCGCTGGGATGAGTGGGAACAGCCACTGCGGGGAACTATCAGCGCGGAACTGAAAAACTGGCTCTCTTCACCGGCGGATATGCTTTTGGGGGCACGGATCTCCGTGACCACGCAGGGTGTGCGCGGTAAAGGCACGGTGGTATTGCAGTTACCGGAAACACCCCTTTCGCTGACTGAGTTTGATATTCCTTTTGAGCTGGCCGGGCAGGTTAATCACAATGATATGTGGGCAGCCGGGCGGGTACCGGCGGTACTGACCGGCACGTTTGCCGACCCGGTGATCCGGTTACGTTCCGGGGCACTGGTGCGGGCTCGCGGACAGCTCAGTCCGGATTTTCTGGTGGAGGAACTGCGTCTGCCGCTGGCGGGAACTTCGCTGTCACAGCAGGGAATTTCCGGGCCGCTGGATGCGATTGTGACGGTGAATAATCTGGAGCTGGGGCGTTACCGTTTTCAGATGAAAGGCCAGGCGCGGGAATTCCTGCCGGATAATGGCCGCTGGTACTGGCAAATCTGGGGAAAAGGCCGGATGAAACCGCTGAATGCGGACTGGACATTCTCCGGTGCCGGTTCCTGGCTGGATGAGGAAATCCGTATCCGTAAACTGAACACCGGATTCAACGGTATCCGCTACGGTATGATGTCGATGGATGCCCCGGCGCTGACACTGTTATCCCCGCTGATCTGGACGCGGGTTGACGGGCAGGAGAAACTGTCCGGGAAAGTGCAGCTGACCACCCGGAAAATCCGGCTGGATAACAGCTATCTGCCGTCCGCGACCTTTGGTATGACGCTGGATGGCCGTGACCCCCGCGATTTTTCTGTTAAAGGCACACTGTCAGCCGGAAAAAATATCGGGCCGATACATTACTGGAGCCGCTGGGACGGTGTCCGTCTGCGTGGTGAGGCCCGCTGGCCGGAGCAGGATATGCGGGCATTTCAGACGCTGATCCCGGCCGACCTGGGGATCACACTGCGTAACGGCGTTTTCTATGCCCAGGCGGCGTATTCTGCTGCACCGGGACAGGGATTTGTCGCCGGCGGGCACTGGGTGGTCAAACAGGCGGGCATGTGGCTGAAAGACGGTGAAGTGAGCGGTGTGGATTTTGTGCTGCCGTGGCGGCTCGCGGACAGCCGCTGGCAGCTCGGCAGTAAAACGCCTGTGATGCTGCGGATTGCGCGGGTTGAGAATCTGTTTGAAGTGACGGATATTAAAGCCGATTTGCAGGGCTATTACCCGTACGATGATACGTATCCGCTGGAACTGTCCGGTGTCAGTCTGGATATTCTGGGCGGACAGGTCACCATGCCGTCACTGACCATTCCGCAGAAAACCGCAGCGGTGATAAAACTGGATAAACTGAATACCGGCCCGCTGATCAATACGCTGAAAGTGACACAGTTTGCCCTTGAAGGCAGTATCAGCGGGGAATTACCGTTTTATATTGATAATCCGCAGTGGATTGTGCATAACGGTTGGGTGGAAAACGACGAACCGCTGACCCTCAATCTGGATAATCAGTTTGTTGAATCGGTCAGTGAAAACAATATTTCAGCGGGTACGGCGATTAACTGGCTGGATTATCTGGTGATGAAACGGGTGCGGACGGATGTTAATCTGACCAACCTGGGTGTCCTGACGATGTCATCAGTGGTTTCCGGCTATAATCCGGTACTGGATGCACGGCGGGCGGTAAATCTGAATTACCGGCATGAGGAAAATGTGTTTCAGTTATGGCGCAGTCTGCGTTTCGGCAGCAATCTGGAAGCCTGGCTGGAAAAGAGTATTTCACAGAATCAGGAGTAACATCCGACGGAGTCAGAATGAAAAAATGGATAGCAGGTGCGGTATTACCG