Homologs in group_661

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02345 FBDBKF_02345 45.4 Morganella morganii S1 ydbH YdbH family protein
EHELCC_02815 EHELCC_02815 45.4 Morganella morganii S2 ydbH YdbH family protein
NLDBIP_00645 NLDBIP_00645 45.4 Morganella morganii S4 ydbH YdbH family protein
LHKJJB_01390 LHKJJB_01390 45.4 Morganella morganii S3 ydbH YdbH family protein
HKOGLL_01430 HKOGLL_01430 45.4 Morganella morganii S5 ydbH YdbH family protein
F4V73_RS04725 F4V73_RS04725 47.2 Morganella psychrotolerans - YdbH family protein

Distribution of the homologs in the orthogroup group_661

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_661

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P52645 0 645 39 7 847 4 ydbH Uncharacterized protein YdbH Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05705
Feature type CDS
Gene -
Product YdbH family protein
Location 1242504 - 1245140 (strand: 1)
Length 2637 (nucleotides) / 878 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_661
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF11739 Dicarboxylate transport

Protein Sequence

MLLKKTIKWTGMILLGVGAVSTTLWLTIPRWLPVVAKTYLPEGVSLSLTQPRLQQWGVFIDDIALKSDSCTLANVQQFTFNYQKQQIDSLSFNSQQLTINEGCFSQLSFADKKETAAVPLDIHALLATIPRLSVDINHVSLMDNQRYNGHFQLKSDTNGRLISYQGDNTQIQALIRDNQWLDIKQLKINLPDDNQIELAAEIALPLNVDSLPENGSISTTLLTSHYAYPLVFIAQWQGNSGTISIAEQGGGQALAVLPWNVTAENITIEKGRWEWFGLDQPLRGGVNINIAQWQQGLTGLRLTARLNVMTQGHAGKGNLVMTIPETAINWLDADIPIQLTGIVNKDLMQASAQLPVKVTGMLTDPTIEFQPGSLLRFKGQLTETLTVKDARLPLAGSTLSSKGFNGHLNAIVLAEDTIWGDYRVHFAGRSTDFLPDQGNWQWRYWGEGNLLPLKARWDIAGTGSWVDNMVSFETLNTGFDVLTYQHTSMLAPRLTLLTPFRWLRDDKNPLFEGKLKLTSQRIDFPAGGFLDRADFIASVKGQSPFRFNMKGELNAKPNIGPITINTRWDGERLRGQMRWPAQPINAFQSLLPEKLGITLDNGEFYTQADFSIAPQQGLVAGGHLVVKQGSMWLKDGVLEGLDFILPWRLNGDEWQLGVKQPVQLRIKRVNNLFEMTDITADLQGFYPITEAKPLVLSNVKVAMLDGTISMAKLALPQHEAAIISLDNLELSRLFTLLKVTQFAASGKVSGELPFFINNNQWIVKDGWLANSSYLTLRLDKDFVDSIDDSNMTAGVAMAWLRYLEISRSWTRVNLSNLGELVLEAEIQGKNPLEDKRRQVNLNYRHQENIFQLWRSLRFGSQLEEWLEKSLSDLGSESE

Flanking regions ( +/- flanking 50bp)

GGTAAAGTGGATGTTCGGAATGTGGTTAATGTGATCAAAAGGAAAATGAGGTGTTGTTAAAGAAAACAATCAAATGGACAGGGATGATACTACTGGGTGTCGGCGCAGTTAGCACGACCTTGTGGCTCACCATTCCACGTTGGTTACCTGTTGTGGCTAAAACCTATTTACCTGAAGGTGTTTCACTCTCTTTAACACAACCTAGGTTACAACAATGGGGTGTTTTTATTGATGATATCGCATTAAAAAGTGATAGCTGTACCTTGGCTAATGTGCAGCAATTTACGTTTAACTATCAAAAACAGCAAATTGATAGCCTATCATTTAATAGTCAACAACTTACTATTAACGAAGGGTGTTTTTCACAATTATCTTTTGCAGATAAAAAAGAGACCGCAGCAGTTCCTCTCGATATTCATGCGTTATTAGCTACTATTCCTCGCTTATCGGTTGATATTAATCATGTTTCTTTAATGGATAATCAGCGCTATAACGGCCATTTTCAGCTTAAAAGTGATACAAATGGGCGATTAATCAGCTATCAGGGAGATAATACGCAGATACAAGCGCTGATCCGTGATAATCAATGGTTAGATATTAAACAATTAAAGATTAATTTACCTGACGATAATCAGATAGAGCTGGCGGCTGAAATCGCGTTACCCCTTAATGTTGATTCATTACCAGAAAATGGTTCTATCAGCACAACATTGTTAACATCCCATTATGCTTACCCATTAGTCTTTATTGCTCAATGGCAGGGGAATAGCGGTACTATTTCTATTGCTGAACAAGGCGGAGGGCAAGCGTTAGCTGTGTTGCCTTGGAATGTAACTGCAGAAAATATCACGATAGAAAAAGGGCGTTGGGAATGGTTTGGGCTTGATCAACCCTTACGTGGTGGTGTGAATATCAACATTGCCCAGTGGCAGCAAGGATTAACGGGGTTACGCTTAACTGCGCGCTTAAATGTTATGACGCAAGGGCATGCAGGGAAAGGGAATTTAGTGATGACGATACCTGAAACGGCGATTAACTGGTTAGATGCTGATATACCTATTCAATTGACAGGCATTGTAAATAAAGATCTCATGCAAGCCAGTGCACAACTTCCCGTTAAAGTGACTGGTATGTTGACAGATCCTACTATCGAATTTCAGCCCGGTTCACTATTACGCTTTAAAGGGCAACTAACAGAAACGCTGACGGTAAAAGATGCTCGTTTACCACTGGCTGGCTCAACATTATCTTCCAAAGGATTTAATGGTCACCTAAATGCGATTGTGTTAGCTGAAGATACTATTTGGGGAGATTATCGGGTCCATTTTGCTGGACGTTCGACCGATTTCTTACCTGATCAGGGCAATTGGCAATGGCGTTATTGGGGAGAGGGCAATTTATTGCCATTAAAAGCGCGTTGGGATATCGCTGGAACTGGCTCTTGGGTAGATAACATGGTGAGTTTTGAGACATTAAATACCGGATTTGATGTTTTAACTTATCAGCATACCAGTATGTTAGCCCCCAGATTGACGCTCTTAACGCCATTTCGTTGGTTAAGAGACGATAAAAACCCATTATTTGAAGGAAAATTGAAGTTAACCAGTCAACGAATCGATTTTCCTGCGGGGGGATTCTTAGATAGAGCTGACTTTATTGCCAGTGTAAAAGGTCAATCTCCTTTTCGTTTTAATATGAAAGGCGAGCTCAATGCCAAGCCAAATATTGGACCGATAACGATTAATACACGTTGGGATGGTGAAAGGCTAAGAGGGCAGATGCGTTGGCCTGCACAACCAATCAATGCCTTTCAATCTTTATTGCCAGAAAAATTAGGCATCACATTAGATAATGGCGAATTTTATACTCAAGCTGACTTTTCTATTGCCCCTCAACAAGGTTTAGTTGCTGGTGGACATTTAGTAGTTAAACAAGGCAGCATGTGGCTAAAAGATGGCGTATTAGAAGGACTCGATTTTATTTTACCTTGGCGTTTAAACGGTGATGAATGGCAACTAGGTGTAAAGCAGCCAGTGCAATTACGCATTAAGCGCGTCAACAACTTATTTGAAATGACAGATATTACCGCCGATCTGCAAGGATTTTACCCTATTACAGAAGCAAAACCTTTAGTTTTATCTAATGTCAAGGTTGCCATGCTTGATGGCACTATTTCTATGGCAAAATTAGCATTACCACAGCATGAAGCGGCGATTATCTCATTAGATAATCTAGAGTTAAGTCGGCTTTTCACTTTATTGAAGGTGACCCAATTTGCCGCATCAGGTAAAGTAAGTGGCGAATTACCTTTCTTTATCAATAACAATCAGTGGATAGTGAAAGATGGGTGGCTGGCTAATTCATCGTACTTAACCCTCAGGCTTGATAAAGATTTTGTTGACTCTATTGATGATAGCAATATGACAGCCGGTGTCGCTATGGCATGGTTACGATATTTAGAGATTAGCCGCTCTTGGACGCGGGTTAATTTAAGCAACCTAGGTGAATTAGTGCTTGAAGCGGAAATCCAAGGGAAAAATCCATTGGAAGACAAACGGCGACAAGTAAATCTTAATTATCGCCATCAAGAAAATATTTTTCAGTTATGGCGCAGCTTGCGATTTGGTTCGCAATTGGAAGAGTGGTTAGAAAAGAGCCTATCCGATTTAGGGAGTGAGTCAGAATGATGTTATTATTTTTAAAAAGACTATTTTTATTTGTTATTTTCACTATCGGC