Homologs in group_733

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02345 FBDBKF_02345 100.0 Morganella morganii S1 ydbH YdbH family protein
EHELCC_02815 EHELCC_02815 100.0 Morganella morganii S2 ydbH YdbH family protein
NLDBIP_00645 NLDBIP_00645 100.0 Morganella morganii S4 ydbH YdbH family protein
LHKJJB_01390 LHKJJB_01390 100.0 Morganella morganii S3 ydbH YdbH family protein
F4V73_RS04725 F4V73_RS04725 74.7 Morganella psychrotolerans - YdbH family protein
PMI_RS05705 PMI_RS05705 45.4 Proteus mirabilis HI4320 - YdbH family protein

Distribution of the homologs in the orthogroup group_733

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_733

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P52645 0 640 40 8 844 4 ydbH Uncharacterized protein YdbH Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_01430
Feature type CDS
Gene ydbH
Product YdbH family protein
Location 264405 - 267014 (strand: 1)
Length 2610 (nucleotides) / 869 (amino acids)
In genomic island -

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_733
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF11739 Dicarboxylate transport

Protein Sequence

MKKLLKVLVVLLVLLMIILPAAWLTIPRWLPAVVKSSLPDGVTLSLSQPKIRAGGLYIEEAVLRSNECQLAGGEKLSLHYQRGGRWIIDAGSLTGDADCFQKLPSGSEETDTTPVDIGALLSQLPPVTLTADNVIPAPWQMYQGKLSLTTAPGRGQQLSYQGENIQAELAVDPALNLTLSQLDATIGDEKFALSGALTLPLNTAELPDKGRLQAEITTTYRPQPLMAAFDWQGRQGVLTLSETDPRTVLLNIPWEATAESILIKSGEWRWDEWEQPLRGTISAELKNWLSSPADMLLGARISVTTQGVRGKGTVVLQLPETPLSLTEFDIPFELAGQVNHNDMWAAGRVPAVLTGTFADPVIRLRSGALVRARGQLSPDFLVEELRLPLAGTSLSQQGISGPLDAIVTVNNLELGRYRFQMKGQAREFLPDNGRWYWQIWGKGRMKPLNADWTFSGAGSWLDEEIRIRKLNTGFNGIRYGMMSMDAPALTLLSPLIWTRVDGQEKLSGKVQLTTRKIRLDNSYLPSATFGMTLDGRDPRDFSVKGTLSAGKNIGPIHYWSRWDGVRLRGEARWPEQDMRAFQTLIPADLGITLRNGVFYAQAAYSAAPGQGFVAGGHWVVKQAGMWLKDGEVSGVDFVLPWRLADSRWQLGSKTPVMLRIARVENLFEVTDIKADLQGYYPYDDTYPLELSGVSLDILGGQVTMPSLTIPQKTAAVIKLDKLNTGPLINTLKVTQFALEGSISGELPFYIDNPQWIVHNGWVENDEPLTLNLDNQFVESVSENNISAGTAINWLDYLVMKRVRTDVNLTNLGVLTMSSVVSGYNPVLDARRAVNLNYRHEENVFQLWRSLRFGSNLEAWLEKSISQNQE

Flanking regions ( +/- flanking 50bp)

TAACGCTTAGTTGATGTATCTGTAACCGGGGAACTGCACCTCTGAGGTCTATGAAAAAATTACTGAAAGTGCTGGTGGTACTGCTTGTTCTGCTGATGATTATCCTCCCGGCAGCCTGGCTGACAATTCCGCGCTGGCTGCCTGCGGTGGTGAAATCCTCTCTGCCTGATGGTGTTACACTGTCACTTTCTCAGCCAAAAATCCGTGCGGGTGGCCTCTATATAGAAGAAGCGGTTCTCCGCAGTAATGAATGTCAGCTGGCGGGCGGGGAAAAGCTGTCACTTCACTATCAGCGCGGCGGCCGCTGGATTATTGATGCCGGTTCACTGACCGGTGATGCGGACTGCTTTCAGAAATTACCTTCCGGCTCTGAAGAAACAGACACTACACCGGTTGATATCGGCGCACTGTTATCGCAGCTGCCGCCGGTGACGCTGACCGCGGATAACGTTATCCCCGCGCCCTGGCAGATGTATCAGGGAAAACTGAGCCTGACAACCGCACCCGGCCGGGGACAGCAACTGAGTTATCAGGGAGAGAACATTCAGGCGGAGCTGGCGGTTGATCCGGCACTGAACCTGACGTTGTCACAACTGGATGCCACTATCGGTGATGAAAAATTTGCGCTCAGCGGCGCACTGACACTGCCGCTGAATACAGCGGAGCTGCCGGATAAAGGCAGATTACAGGCTGAAATCACAACCACATACCGGCCACAGCCGCTGATGGCTGCCTTTGACTGGCAGGGGCGGCAGGGCGTTCTGACGCTGAGTGAAACTGATCCGCGGACCGTGCTGCTGAATATTCCCTGGGAAGCCACGGCGGAAAGTATCCTGATTAAAAGCGGGGAATGGCGCTGGGATGAGTGGGAACAGCCACTGCGGGGAACTATCAGCGCGGAACTGAAAAACTGGCTCTCTTCACCGGCGGATATGCTTTTGGGGGCACGGATCTCCGTGACCACGCAGGGTGTGCGCGGTAAAGGCACGGTGGTATTGCAGTTACCGGAAACACCCCTTTCGCTGACTGAGTTTGATATTCCTTTTGAGCTGGCCGGGCAGGTTAATCACAATGATATGTGGGCAGCCGGGCGGGTACCGGCGGTACTGACCGGCACGTTTGCCGACCCGGTGATCCGGTTACGTTCCGGGGCACTGGTGCGGGCTCGCGGACAGCTCAGTCCGGATTTTCTGGTGGAGGAACTGCGTCTGCCGCTGGCGGGAACTTCGCTGTCACAGCAGGGAATTTCCGGGCCGCTGGATGCGATTGTGACGGTGAATAATCTGGAGCTGGGGCGTTACCGTTTTCAGATGAAAGGCCAGGCGCGGGAATTCCTGCCGGATAATGGCCGCTGGTACTGGCAAATCTGGGGAAAAGGCCGGATGAAACCGCTGAATGCGGACTGGACATTCTCCGGTGCCGGTTCCTGGCTGGATGAGGAAATCCGTATCCGTAAACTGAACACCGGATTCAACGGTATCCGCTACGGTATGATGTCGATGGATGCCCCGGCGCTGACACTGTTATCCCCGCTGATCTGGACGCGGGTTGACGGGCAGGAGAAACTGTCCGGGAAAGTGCAGCTGACCACCCGGAAAATCCGGCTGGATAACAGCTATCTGCCGTCCGCGACCTTTGGTATGACGCTGGATGGCCGTGACCCCCGCGATTTTTCTGTTAAAGGCACACTGTCAGCCGGAAAAAATATCGGGCCGATACATTACTGGAGCCGCTGGGACGGTGTCCGTCTGCGTGGTGAGGCCCGCTGGCCGGAGCAGGATATGCGGGCATTTCAGACGCTGATCCCGGCCGACCTGGGGATCACACTGCGTAACGGCGTTTTCTATGCCCAGGCGGCGTATTCTGCTGCACCGGGACAGGGATTTGTCGCCGGCGGGCACTGGGTGGTCAAACAGGCGGGCATGTGGCTGAAAGACGGTGAAGTGAGCGGTGTGGATTTTGTGCTGCCGTGGCGGCTCGCGGACAGCCGCTGGCAGCTCGGCAGTAAAACGCCTGTGATGCTGCGGATTGCGCGGGTTGAGAATCTGTTTGAAGTGACGGATATTAAAGCCGATTTGCAGGGCTATTACCCGTACGATGATACGTATCCGCTGGAACTGTCCGGTGTCAGTCTGGATATTCTGGGCGGACAGGTCACCATGCCGTCACTGACCATTCCGCAGAAAACCGCAGCGGTGATAAAACTGGATAAACTGAATACCGGCCCGCTGATCAATACGCTGAAAGTGACACAGTTTGCCCTTGAAGGCAGTATCAGCGGGGAATTACCGTTTTATATTGATAATCCGCAGTGGATTGTGCATAACGGTTGGGTGGAAAACGACGAACCGCTGACCCTCAATCTGGATAATCAGTTTGTTGAATCGGTCAGTGAAAACAATATTTCAGCGGGTACGGCGATTAACTGGCTGGATTATCTGGTGATGAAACGGGTGCGGACGGATGTTAATCTGACCAACCTGGGTGTCCTGACGATGTCATCAGTGGTTTCCGGCTATAATCCGGTACTGGATGCACGGCGGGCGGTAAATCTGAATTACCGGCATGAGGAAAATGTGTTTCAGTTATGGCGCAGTCTGCGTTTCGGCAGCAATCTGGAAGCCTGGCTGGAAAAGAGTATTTCACAGAATCAGGAGTAACATCCGACGGAGTCAGAATGAAAAAATGGATAGCAGGTGCGGTATTACCG