Orthogroup:group_60


Homologs in group_60

Help

13 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07785 FBDBKF_07785 Morganella morganii S1 hxlR DNA-binding transcriptional regulator, HxlR family
FBDBKF_10060 FBDBKF_10060 Morganella morganii S1 hxlR DNA-binding transcriptional regulator, HxlR family
EHELCC_04860 EHELCC_04860 Morganella morganii S2 hxlR DNA-binding transcriptional regulator, HxlR family
EHELCC_13615 EHELCC_13615 Morganella morganii S2 hxlR DNA-binding transcriptional regulator, HxlR family
NLDBIP_04860 NLDBIP_04860 Morganella morganii S4 hxlR DNA-binding transcriptional regulator, HxlR family
NLDBIP_14060 NLDBIP_14060 Morganella morganii S4 hxlR DNA-binding transcriptional regulator, HxlR family
LHKJJB_08790 LHKJJB_08790 Morganella morganii S3 hxlR DNA-binding transcriptional regulator, HxlR family
LHKJJB_13770 LHKJJB_13770 Morganella morganii S3 hxlR DNA-binding transcriptional regulator, HxlR family
HKOGLL_08340 HKOGLL_08340 Morganella morganii S5 hxlR DNA-binding transcriptional regulator, HxlR family
HKOGLL_12765 HKOGLL_12765 Morganella morganii S5 hxlR DNA-binding transcriptional regulator, HxlR family
F4V73_RS00275 F4V73_RS00275 Morganella psychrotolerans - helix-turn-helix domain-containing protein
F4V73_RS01030 F4V73_RS01030 Morganella psychrotolerans - helix-turn-helix domain-containing protein
F4V73_RS13260 F4V73_RS13260 Morganella psychrotolerans - helix-turn-helix domain-containing protein

Distribution of group_60 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_60 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_60

Orthogroup content: 13 members

Help

This page summarizes the annotation of all members of the orthologous group group_60.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hxlR 10
2 - 3

Product

# Product Occurence
1 DNA-binding transcriptional regulator, HxlR family 10
2 helix-turn-helix domain-containing protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1733 13 K Transcription (K) DNA-binding transcriptional regulator, HxlR family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01638 13 HxlR-like helix-turn-helix

Annotations of the 17 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional activator HxlR 1
HTH-type transcriptional regulator YodB 1
Putative regulatory protein MalR 1
Uncharacterized HTH-type transcriptional regulator BH0655 1
Uncharacterized HTH-type transcriptional regulator MT3179 1
Uncharacterized HTH-type transcriptional regulator MTH_1285 1
Uncharacterized HTH-type transcriptional regulator Mb3122 1
Uncharacterized HTH-type transcriptional regulator Rv3095 1
Uncharacterized HTH-type transcriptional regulator YdeP 1
Uncharacterized HTH-type transcriptional regulator YdzF 1
Uncharacterized HTH-type transcriptional regulator YkvN 1
Uncharacterized HTH-type transcriptional regulator YtcD 1
Uncharacterized HTH-type transcriptional regulator YtfH 2
Uncharacterized HTH-type transcriptional regulator YvaP 1
Uncharacterized HTH-type transcriptional regulator YybR 1
Uncharacterized HTH-type transcriptional regulator sll1512 1

Protein length

Min length 115
Max length 146
Mean length (sd) 122.6 (7.5)
Median length 123.0

Protein length distribution