Orthogroup:group_511


Homologs in group_511

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01055 FBDBKF_01055 Morganella morganii S1 ispG flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
EHELCC_00490 EHELCC_00490 Morganella morganii S2 ispG flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
NLDBIP_02970 NLDBIP_02970 Morganella morganii S4 ispG flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
LHKJJB_04485 LHKJJB_04485 Morganella morganii S3 ispG flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
HKOGLL_02560 HKOGLL_02560 Morganella morganii S5 ispG flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
F4V73_RS07130 F4V73_RS07130 Morganella psychrotolerans ispG flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
PMI_RS09105 PMI_RS09105 Proteus mirabilis HI4320 ispG flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase

Distribution of group_511 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_511 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_511

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_511.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ispG 7

Product

# Product Occurence
1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0821 7 I Lipid transport and metabolism (I) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG/GcpE

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03526 7 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] Terpenoid backbone biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites		 C5 isoprenoid biosynthesis, non-mevalonate pathway

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04551 7 GcpE protein

Annotations of the 441 SwissProt hits

Annotation Number of occurrences
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) 25
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic 2
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) 410
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) 1 2
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) 2 2

Protein length

Min length 373
Max length 374
Mean length (sd) 373.9 (0.4)
Median length 374.0

Protein length distribution