Orthogroup:group_48


Homologs in group_48

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07250 FBDBKF_07250 Morganella morganii S1 tyrB Aspartate/aromatic aminotransferase
FBDBKF_17040 FBDBKF_17040 Morganella morganii S1 tyrB Aspartate/aromatic aminotransferase
EHELCC_03720 EHELCC_03720 Morganella morganii S2 tyrB Aspartate/aromatic aminotransferase
EHELCC_16550 EHELCC_16550 Morganella morganii S2 tyrB Aspartate/aromatic aminotransferase
NLDBIP_03720 NLDBIP_03720 Morganella morganii S4 tyrB Aspartate/aromatic aminotransferase
NLDBIP_16760 NLDBIP_16760 Morganella morganii S4 tyrB Aspartate/aromatic aminotransferase
LHKJJB_09550 LHKJJB_09550 Morganella morganii S3 tyrB Aspartate/aromatic aminotransferase
LHKJJB_16710 LHKJJB_16710 Morganella morganii S3 tyrB Aspartate/aromatic aminotransferase
HKOGLL_09425 HKOGLL_09425 Morganella morganii S5 tyrB Aspartate/aromatic aminotransferase
HKOGLL_17675 HKOGLL_17675 Morganella morganii S5 tyrB Aspartate/aromatic aminotransferase
F4V73_RS01435 F4V73_RS01435 Morganella psychrotolerans - amino acid aminotransferase
F4V73_RS18520 F4V73_RS18520 Morganella psychrotolerans - amino acid aminotransferase
PMI_RS03755 PMI_RS03755 Proteus mirabilis HI4320 - amino acid aminotransferase
PMI_RS13520 PMI_RS13520 Proteus mirabilis HI4320 - amino acid aminotransferase

Distribution of group_48 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_48 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_48

Orthogroup content: 14 members

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This page summarizes the annotation of all members of the orthologous group group_48.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tyrB 10
2 - 4

Product

# Product Occurence
1 Aspartate/aromatic aminotransferase 10
2 amino acid aminotransferase 4

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1448 14 E Amino acid transport and metabolism (E) Aspartate/aromatic aminotransferase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00813 7 aspartate aminotransferase [EC:2.6.1.1] Arginine biosynthesis
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Arginine and proline metabolism
Tyrosine metabolism
Phenylalanine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Novobiocin biosynthesis
Isoquinoline alkaloid biosynthesis
Tropane, piperidine and pyridine alkaloid biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
2-Oxocarboxylic acid metabolism
Biosynthesis of amino acids		 -
K00832 7 aromatic-amino-acid transaminase [EC:2.6.1.57] Cysteine and methionine metabolism
Tyrosine metabolism
Phenylalanine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Novobiocin biosynthesis
Isoquinoline alkaloid biosynthesis
Tropane, piperidine and pyridine alkaloid biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids		 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
Tyrosine biosynthesis, chorismate => HPP => tyrosine
Methionine salvage pathway
Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Tyrosine degradation, tyrosine => homogentisate

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00155 14 Aminotransferase class I and II

Annotations of the 68 SwissProt hits

Annotation Number of occurrences
Aminotransferase tasG 1
Arginine--pyruvate transaminase AruH 1
Aromatic-amino-acid aminotransferase 4
Aspartate aminotransferase 9
Aspartate aminotransferase 1 1
Aspartate aminotransferase 3, chloroplastic 1
Aspartate aminotransferase P2, mitochondrial (Fragment) 1
Aspartate aminotransferase, chloroplastic 1
Aspartate aminotransferase, cytoplasmic 16
Aspartate aminotransferase, cytoplasmic isozyme 1 1
Aspartate aminotransferase, cytoplasmic isozyme 2 1
Aspartate aminotransferase, mitochondrial 16
Histidinol-phosphate aminotransferase 4
Histidinol-phosphate aminotransferase 1 1
L-serine phosphate decarboxylase 1
L-tyrosine:2-oxoglutarate aminotransferase ucdG 1
LL-diaminopimelate aminotransferase 1
Putative aminotransferase YugH 1
Putative aspartate aminotransferase, cytoplasmic 2 3
Tyrosine aminotransferase 2
Valine--pyruvate aminotransferase 1

Protein length

Min length 396
Max length 398
Mean length (sd) 396.9 (1.0)
Median length 396.5

Protein length distribution