Orthogroup:group_48


Homologs in group_48

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02200 FBDBKF_02200 Morganella morganii S1 lsrK autoinducer-2 kinase
FBDBKF_04695 FBDBKF_04695 Morganella morganii S1 xylB xylulokinase
EHELCC_02670 EHELCC_02670 Morganella morganii S2 lsrK autoinducer-2 kinase
EHELCC_05985 EHELCC_05985 Morganella morganii S2 xylB xylulokinase
NLDBIP_00790 NLDBIP_00790 Morganella morganii S4 lsrK autoinducer-2 kinase
NLDBIP_06305 NLDBIP_06305 Morganella morganii S4 xylB xylulokinase
LHKJJB_01245 LHKJJB_01245 Morganella morganii S3 lsrK autoinducer-2 kinase
LHKJJB_03185 LHKJJB_03185 Morganella morganii S3 xylB xylulokinase
HKOGLL_01285 HKOGLL_01285 Morganella morganii S5 lsrK autoinducer-2 kinase
HKOGLL_06660 HKOGLL_06660 Morganella morganii S5 xylB xylulokinase
F4V73_RS04570 F4V73_RS04570 Morganella psychrotolerans lsrK autoinducer-2 kinase
F4V73_RS09170 F4V73_RS09170 Morganella psychrotolerans xylB xylulokinase
PMI_RS06145 PMI_RS06145 Proteus mirabilis HI4320 xylB xylulokinase

Distribution of group_48 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_48 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_48

Orthogroup content: 13 members

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This page summarizes the annotation of all members of the orthologous group group_48.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lsrK 6
2 xylB 7

Product

# Product Occurence
1 autoinducer-2 kinase 6
2 xylulokinase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1070 13 G Carbohydrate transport and metabolism (G) Sugar (pentulose or hexulose) kinase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00854 7 xylulokinase [EC:2.7.1.17] Pentose and glucuronate interconversions
Metabolic pathways		 Glucuronate pathway (uronate pathway)
K11216 6 autoinducer-2 kinase [EC:2.7.1.189] Quorum sensing -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00370 13 FGGY family of carbohydrate kinases, N-terminal domain
PF02782 13 FGGY family of carbohydrate kinases, C-terminal domain

Annotations of the 643 SwissProt hits

Annotation Number of occurrences
Apulose kinase 1
Autoinducer-2 kinase 25
Bifunctional enzyme RhaA/RhaB 1
D-ribulose kinase 1
D-xylulose kinase A 1
Erythritol kinase 1
FGGY carbohydrate kinase domain-containing protein 4
Gluconokinase 2
Glycerol kinase 412
Glycerol kinase 1 8
Glycerol kinase 2 11
Glycerol kinase 3 2
Glycerol kinase 5 6
Glycerol kinase, glycosomal 1
L-Rhamnulokinase 1
L-fuculokinase 5
L-xylulose/3-keto-L-gulonate kinase 1
Probable D-xylulose kinase A 10
Probable L-xylulose kinase 2
Probable glycerol kinase 2
Putative sugar kinase YoaC 1
Rhamnulokinase 44
Ribulokinase 74
Ribulokinase 1 1
Ribulokinase 2 1
Uncharacterized sugar kinase R08D7.7 1
Uncharacterized sugar kinase YgcE 1
Xylulose kinase 20
Xylulose kinase (Fragment) 2
Xylulose kinase 2 1

Protein length

Min length 484
Max length 531
Mean length (sd) 514.4 (16.6)
Median length 503.0

Protein length distribution