Orthogroup:group_46


Homologs in group_46

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01620 FBDBKF_01620 Morganella morganii S1 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
FBDBKF_04765 FBDBKF_04765 Morganella morganii S1 agaE PTS N-acetylgalactosamine transporter subunit IID
EHELCC_02090 EHELCC_02090 Morganella morganii S2 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
EHELCC_06055 EHELCC_06055 Morganella morganii S2 agaE PTS N-acetylgalactosamine transporter subunit IID
NLDBIP_01370 NLDBIP_01370 Morganella morganii S4 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
NLDBIP_06375 NLDBIP_06375 Morganella morganii S4 agaE PTS N-acetylgalactosamine transporter subunit IID
LHKJJB_00665 LHKJJB_00665 Morganella morganii S3 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
LHKJJB_03255 LHKJJB_03255 Morganella morganii S3 agaE PTS N-acetylgalactosamine transporter subunit IID
HKOGLL_00705 HKOGLL_00705 Morganella morganii S5 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
HKOGLL_06730 HKOGLL_06730 Morganella morganii S5 agaE PTS N-acetylgalactosamine transporter subunit IID
F4V73_RS03960 F4V73_RS03960 Morganella psychrotolerans - PTS mannose transporter subunit IID
F4V73_RS09235 F4V73_RS09235 Morganella psychrotolerans agaE PTS N-acetylgalactosamine transporter subunit IID
PMI_RS10525 PMI_RS10525 Proteus mirabilis HI4320 - PTS system mannose/fructose/sorbose family transporter subunit IID

Distribution of group_46 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_46 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_46

Orthogroup content: 13 members

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This page summarizes the annotation of all members of the orthologous group group_46.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 manZ 5
2 agaE 6
3 - 2

Product

# Product Occurence
1 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component 5
2 PTS N-acetylgalactosamine transporter subunit IID 6
3 PTS mannose transporter subunit IID 1
4 PTS system mannose/fructose/sorbose family transporter subunit IID 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3716 13 G Carbohydrate transport and metabolism (G) Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03613 13 PTS system mannose/fructose/sorbose family IID component

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Fructose permease IID component 1
N-acetylgalactosamine permease IID component 1
PTS system mannose-specific EIID component 3
PTS system sorbose-specific EIID component 2

Protein length

Min length 285
Max length 296
Mean length (sd) 288.7 (3.8)
Median length 291.0

Protein length distribution