COG3716


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3716, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG3716 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2491 FBDBKF_01620 17314 18171 -1 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component Morganella morganii S1
1 group_903 FBDBKF_04765 154797 155672 1 agaE PTS N-acetylgalactosamine transporter subunit IID Morganella morganii S1
2 group_2491 EHELCC_02090 405134 405991 -1 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component Morganella morganii S2
3 group_903 EHELCC_06055 214254 215129 1 agaE PTS N-acetylgalactosamine transporter subunit IID Morganella morganii S2
4 group_2491 NLDBIP_01370 274145 275002 1 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component Morganella morganii S4
5 group_903 NLDBIP_06375 255319 256194 1 agaE PTS N-acetylgalactosamine transporter subunit IID Morganella morganii S4
6 group_2491 LHKJJB_00665 117683 118540 -1 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component Morganella morganii S3
7 group_903 LHKJJB_03255 232843 233718 1 agaE PTS N-acetylgalactosamine transporter subunit IID Morganella morganii S3
8 group_2491 HKOGLL_00705 123194 124051 -1 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component Morganella morganii S5
9 group_903 HKOGLL_06730 154707 155582 1 agaE PTS N-acetylgalactosamine transporter subunit IID Morganella morganii S5
10 group_2491 F4V73_RS03960 840349 841206 -1 PTS mannose transporter subunit IID Morganella psychrotolerans
11 group_903 F4V73_RS09235 1934408 1935286 1 agaE PTS N-acetylgalactosamine transporter subunit IID Morganella psychrotolerans
12 group_903 PMI_RS10525 2315425 2316315 -1 PTS system mannose/fructose/sorbose family transporter subunit IID Proteus mirabilis HI4320