Homologs in group_46

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12 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01620 FBDBKF_01620 95.4 Morganella morganii S1 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
FBDBKF_04765 FBDBKF_04765 36.0 Morganella morganii S1 agaE PTS N-acetylgalactosamine transporter subunit IID
EHELCC_02090 EHELCC_02090 95.4 Morganella morganii S2 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
EHELCC_06055 EHELCC_06055 36.0 Morganella morganii S2 agaE PTS N-acetylgalactosamine transporter subunit IID
NLDBIP_01370 NLDBIP_01370 95.4 Morganella morganii S4 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
NLDBIP_06375 NLDBIP_06375 36.0 Morganella morganii S4 agaE PTS N-acetylgalactosamine transporter subunit IID
LHKJJB_00665 LHKJJB_00665 95.4 Morganella morganii S3 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
LHKJJB_03255 LHKJJB_03255 36.0 Morganella morganii S3 agaE PTS N-acetylgalactosamine transporter subunit IID
HKOGLL_00705 HKOGLL_00705 95.4 Morganella morganii S5 manZ Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component
HKOGLL_06730 HKOGLL_06730 36.0 Morganella morganii S5 agaE PTS N-acetylgalactosamine transporter subunit IID
F4V73_RS09235 F4V73_RS09235 36.7 Morganella psychrotolerans agaE PTS N-acetylgalactosamine transporter subunit IID
PMI_RS10525 PMI_RS10525 36.7 Proteus mirabilis HI4320 - PTS system mannose/fructose/sorbose family transporter subunit IID

Distribution of the homologs in the orthogroup group_46

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_46

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P69806 3.16e-169 472 81 2 283 3 manZ PTS system mannose-specific EIID component Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P69805 3.41e-169 472 81 2 283 1 manZ PTS system mannose-specific EIID component Escherichia coli (strain K12)
P69807 3.41e-169 472 81 2 283 3 manZ PTS system mannose-specific EIID component Escherichia coli O157:H7
P26382 4.24e-114 332 61 2 274 4 levG Fructose permease IID component Bacillus subtilis (strain 168)
P37083 2.04e-106 313 58 2 274 2 sorM PTS system sorbose-specific EIID component Klebsiella pneumoniae
Q9RGG2 1.29e-95 286 53 2 273 2 sorD PTS system sorbose-specific EIID component Lacticaseibacillus casei
P42911 8.7e-45 155 32 7 276 3 agaD N-acetylgalactosamine permease IID component Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03960
Feature type CDS
Gene -
Product PTS mannose transporter subunit IID
Location 840349 - 841206 (strand: -1)
Length 858 (nucleotides) / 285 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_46
Orthogroup size 13
N. genomes 7

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Genomic region

Domains

PF03613 PTS system mannose/fructose/sorbose family IID component

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3716 Carbohydrate transport and metabolism (G) G Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component

Kegg Ortholog Annotation(s)

Protein Sequence

MVDTTSNITAKKQLRKSDIRGVFIRSNLFQGSWNFERMQAMGYAFSMVPVIRRLYPENNDERRQAIKRHMEFFNTHPYMAAPILGVTCAMEEQRANGADIDDGAINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMTGSLLGPLLFFFLFNIVRLATRYYGVTYGYKKGLDIVQDMGGGFLQKLTEGASILGLFVMGALVNKWTKVNIPLVVSEIKNPTTGEIDVTTVQTILNQLMPGLMPLLLTFGCMWLLRRKVNALLIIIGFFVLGILGYVFGFLAP

Flanking regions ( +/- flanking 50bp)

TGCCGGCAAGAACGACCTCGATAACGAGTTAGACTAAGAAGGTGAACAACATGGTTGATACAACAAGCAACATAACTGCAAAAAAACAGTTAAGAAAGAGCGATATCCGTGGTGTGTTCATCCGCTCAAACCTGTTTCAGGGGTCGTGGAACTTTGAACGTATGCAGGCGATGGGTTACGCCTTCTCCATGGTGCCGGTTATCCGCCGTCTTTATCCTGAAAATAACGACGAGCGCCGTCAGGCTATCAAACGCCACATGGAATTCTTCAACACGCATCCGTATATGGCAGCCCCTATCCTCGGGGTAACCTGTGCGATGGAAGAGCAGCGCGCCAATGGTGCTGATATCGACGATGGTGCCATCAATGGTATCAAAGTCGGTCTGATGGGACCGTTAGCCGGTGTGGGTGACCCTATTTTCTGGGGAACCGTGCGTCCGGTATTTGCCGCACTCGGTGCCGGTATTGCCATGACCGGCAGCCTGCTCGGGCCACTGCTGTTCTTCTTCCTGTTCAATATCGTCCGCCTTGCCACCCGTTACTACGGTGTGACGTACGGCTATAAAAAAGGATTGGATATCGTTCAGGATATGGGCGGCGGCTTCCTCCAGAAACTGACAGAAGGCGCCTCTATTCTCGGCCTCTTTGTCATGGGGGCGCTGGTGAACAAATGGACAAAAGTGAATATTCCGCTGGTGGTATCGGAGATTAAAAACCCGACCACAGGCGAGATAGATGTCACCACTGTCCAGACCATTCTTAACCAGTTGATGCCGGGTCTGATGCCACTGTTGCTTACCTTCGGGTGTATGTGGCTGCTGCGCCGCAAAGTAAATGCGCTGCTGATTATTATCGGTTTCTTTGTGCTCGGTATTCTGGGTTACGTTTTCGGTTTCCTGGCACCGTAATCAGTAAAAAAGTATGTTAGTTTAAGCGGGAGGAAAACCTCCCGTTTTTT