Homologs in group_903

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04765 FBDBKF_04765 40.9 Morganella morganii S1 agaE PTS N-acetylgalactosamine transporter subunit IID
EHELCC_06055 EHELCC_06055 40.9 Morganella morganii S2 agaE PTS N-acetylgalactosamine transporter subunit IID
NLDBIP_06375 NLDBIP_06375 40.9 Morganella morganii S4 agaE PTS N-acetylgalactosamine transporter subunit IID
LHKJJB_03255 LHKJJB_03255 40.9 Morganella morganii S3 agaE PTS N-acetylgalactosamine transporter subunit IID
HKOGLL_06730 HKOGLL_06730 40.9 Morganella morganii S5 agaE PTS N-acetylgalactosamine transporter subunit IID
F4V73_RS09235 F4V73_RS09235 39.0 Morganella psychrotolerans agaE PTS N-acetylgalactosamine transporter subunit IID

Distribution of the homologs in the orthogroup group_903

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_903

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42911 2.07e-52 175 35 3 262 3 agaD N-acetylgalactosamine permease IID component Escherichia coli (strain K12)
P69805 1.34e-41 148 32 9 291 1 manZ PTS system mannose-specific EIID component Escherichia coli (strain K12)
P69807 1.34e-41 148 32 9 291 3 manZ PTS system mannose-specific EIID component Escherichia coli O157:H7
P69806 1.46e-41 148 32 9 291 3 manZ PTS system mannose-specific EIID component Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P37083 6.49e-39 140 36 9 276 2 sorM PTS system sorbose-specific EIID component Klebsiella pneumoniae
P26382 8.34e-35 130 35 10 278 4 levG Fructose permease IID component Bacillus subtilis (strain 168)
Q9RGG2 9.47e-33 125 33 10 282 2 sorD PTS system sorbose-specific EIID component Lacticaseibacillus casei

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10525
Feature type CDS
Gene -
Product PTS system mannose/fructose/sorbose family transporter subunit IID
Location 2315425 - 2316315 (strand: -1)
Length 891 (nucleotides) / 296 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_903
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF03613 PTS system mannose/fructose/sorbose family IID component

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3716 Carbohydrate transport and metabolism (G) G Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02747 N-acetylgalactosamine PTS system EIID component Galactose metabolism
Metabolic pathways
Phosphotransferase system (PTS)		 -

Protein Sequence

MVSDNSTALKTQDKPETGSLIDGIDEYQDTAVRKVITKGILWKCAFRGLFMEGNFNFERMQGGGFAFSIIPALKKIHGNNKRDYATSLKNHLQFFNASPKLFTFLLGTAVAMEENKEKPSTVNVMKVAGMGPTGGIGDAIDHMTLMPLTLALGASIAMEGSIAGPFVFFFLYQIVHFLVYFGLMFMGYRAGTAAMVNMSDATEKLAKAANIMGIFVIGALSATFIKVQTTASLELGGKVVELQTALFDKIMPNLLPLCLVFLMYKMVKSTGFWGKPPVLIFSTLAFGVIGHVLGFL

Flanking regions ( +/- flanking 50bp)

CTTTAGTGGTAACAATAAAAATTCAAGTCAGCAGAATGAGGATTTCGAAGATGGTATCTGATAACAGCACCGCATTGAAAACGCAGGATAAACCAGAAACAGGTTCTTTGATTGATGGCATTGATGAGTATCAAGATACTGCTGTCAGAAAAGTTATTACTAAAGGCATACTTTGGAAGTGTGCATTCCGTGGCTTATTTATGGAAGGTAACTTCAACTTTGAACGTATGCAAGGTGGTGGATTTGCTTTCTCAATTATTCCAGCATTGAAGAAAATTCACGGCAATAATAAACGCGATTATGCAACATCGTTGAAAAACCATCTGCAATTTTTTAATGCCAGTCCAAAGCTGTTTACCTTTTTATTAGGAACGGCGGTGGCAATGGAAGAGAACAAAGAAAAGCCATCGACTGTTAATGTGATGAAAGTGGCAGGAATGGGGCCGACTGGGGGTATTGGCGATGCTATCGACCATATGACCTTAATGCCTTTGACCTTAGCATTAGGTGCTTCTATTGCAATGGAAGGCTCGATTGCAGGACCTTTCGTTTTCTTCTTCTTGTATCAAATTGTGCATTTTTTAGTGTATTTCGGACTGATGTTTATGGGCTATCGCGCAGGTACTGCGGCAATGGTCAATATGAGCGATGCCACTGAAAAATTAGCGAAAGCGGCAAATATTATGGGGATCTTTGTTATTGGTGCGCTCTCGGCGACCTTTATCAAAGTGCAAACCACCGCCTCGCTGGAACTTGGCGGAAAAGTCGTTGAATTACAAACAGCCCTCTTCGACAAAATTATGCCGAATTTACTGCCACTGTGCTTAGTTTTCTTAATGTACAAAATGGTGAAAAGTACCGGTTTTTGGGGTAAGCCACCGGTATTGATTTTTTCAACCCTAGCATTTGGCGTTATTGGGCATGTATTAGGATTCTTATAAAAAAGAGATGCCCTAATTGTCGACACTGTTAATCGAAATACATTATTAAC