Orthogroup:group_395


Homologs in group_395

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15235 FBDBKF_15235 Morganella morganii S1 recA recombinase RecA
EHELCC_11010 EHELCC_11010 Morganella morganii S2 recA recombinase RecA
NLDBIP_11355 NLDBIP_11355 Morganella morganii S4 recA recombinase RecA
LHKJJB_11215 LHKJJB_11215 Morganella morganii S3 recA recombinase RecA
HKOGLL_09825 HKOGLL_09825 Morganella morganii S5 recA recombinase RecA
F4V73_RS12210 F4V73_RS12210 Morganella psychrotolerans recA recombinase RecA
F4V73_RS17985 F4V73_RS17985 Morganella psychrotolerans - hypothetical protein
PMI_RS01795 PMI_RS01795 Proteus mirabilis HI4320 recA recombinase RecA

Distribution of group_395 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_395 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_395

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_395.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 recA 7
2 - 1

Product

# Product Occurence
1 recombinase RecA 7
2 hypothetical protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0468 8 L Replication, recombination and repair (L) RecA/RadA recombinase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03553 8 recombination protein RecA Homologous recombination -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00154 8 recA bacterial DNA recombination protein
PF21096 7 RecA C-terminal domain

Annotations of the 613 SwissProt hits

Annotation Number of occurrences
Mitochondrial DNA repair protein recA homolog 1
Protein RecA 597
Protein RecA (Fragment) 12
Protein RecA 1 1
Protein RecA 2 1
Protein RecA, chromosomal 1

Protein length

Min length 355
Max length 381
Mean length (sd) 359.0 (8.9)
Median length 356.0

Protein length distribution