Orthogroup:group_386


Homologs in group_386

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8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20035 FBDBKF_20035 Morganella morganii S1 sfaG S-fimbrial protein subunit SfaG
EHELCC_03495 EHELCC_03495 Morganella morganii S2 sfaG S-fimbrial protein subunit SfaG
NLDBIP_03495 NLDBIP_03495 Morganella morganii S4 sfaG S-fimbrial protein subunit SfaG
LHKJJB_09325 LHKJJB_09325 Morganella morganii S3 sfaG S-fimbrial protein subunit SfaG
HKOGLL_09650 HKOGLL_09650 Morganella morganii S5 sfaG S-fimbrial protein subunit SfaG
PMI_RS07085 PMI_RS07085 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS13460 PMI_RS13460 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS17135 PMI_RS17135 Proteus mirabilis HI4320 - fimbrial protein

Distribution of group_386 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_386 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_386

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_386.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sfaG 5
2 - 3

Product

# Product Occurence
1 S-fimbrial protein subunit SfaG 5
2 fimbrial protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 8 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07345 1 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -
K07348 1 minor fimbrial subunit - -
K07355 6 fimbrial-like protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 8 Fimbrial protein

Annotations of the 42 SwissProt hits

Annotation Number of occurrences
F17 fimbrial protein 1
Fimbria A protein 1
Fimbrial adapter PapK 2
Fimbrial protein 987P 1
Fimbrial subunit type 1 3
Fimbrial-like protein FimF 1
Fimbrin-like protein FimI 2
KS71A fimbrillin 1
Long polar fimbria protein A 1
Major fimbrial subunit 1
Minor fimbrial subunit HifD 2
Probable major fimbrial subunit LpfA 1
Protein FimF 1
Protein LpfE 1
Protein PrsK 1
Putative fimbrin-like protein FimI 1
Putative minor fimbrial subunit PmfF 1
S-fimbrial protein subunit SfaA 1
S-fimbrial protein subunit SfaG 1
Type-1 fimbrial protein subunit 1
Type-1 fimbrial protein, A chain 4
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein SfmA 2
Uncharacterized fimbrial-like protein SfmF 1
Uncharacterized fimbrial-like protein YbgD 1
Uncharacterized fimbrial-like protein YcbU 1
Uncharacterized fimbrial-like protein YcbV 1
Uncharacterized fimbrial-like protein YdeR 1
Uncharacterized fimbrial-like protein YdeS 1
Uncharacterized fimbrial-like protein YfcP 1
Uncharacterized fimbrial-like protein YgiL 1
Uncharacterized fimbrial-like protein YraH 1

Protein length

Min length 172
Max length 185
Mean length (sd) 182.8 (4.7)
Median length 185.0

Protein length distribution