VFG044304


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG044304, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein ABC transporter ATP-binding protein/permease
VF ID VF1251
Category Nutritional/Metabolic factor
Protein ID WP_000588838
Vf_category_id VFC0272

Occurence in the database

VFG044304 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_412 FBDBKF_17905 20267 21994 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S1
1 group_412 EHELCC_06430 14382 16109 -1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S2
2 group_412 NLDBIP_06750 14255 15982 -1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S4
3 group_412 LHKJJB_18910 20275 22002 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S3
4 group_412 HKOGLL_04640 253659 255386 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S5
5 group_412 PMI_RS12860 2853918 2855645 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320