Orthogroup:group_3704


Homologs in group_3704

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3 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20375 FBDBKF_20375 Morganella morganii S1 ompA OmpA family protein
F4V73_RS16850 F4V73_RS16850 Morganella psychrotolerans - OmpA family protein
F4V73_RS19125 F4V73_RS19125 Morganella psychrotolerans - OmpA family protein

Distribution of group_3704 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3704 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3704

Orthogroup content: 3 members

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This page summarizes the annotation of all members of the orthologous group group_3704.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ompA 1
2 - 2

Product

# Product Occurence
1 OmpA family protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2885 3 M Cell wall/membrane/envelope biogenesis (M) Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00691 3 OmpA family

Annotations of the 60 SwissProt hits

Annotation Number of occurrences
Motility protein B 1
Outer membrane porin F 3
Outer membrane protein A 16
Outer membrane protein A (Fragment) 5
Outer membrane protein Omp38 3
Outer membrane protein P.III 1
Outer membrane protein P5 3
Outer membrane protein Tpn50 1
Outer membrane protein class 4 2
Outer-membrane lipoprotein YfiB 1
Peptidoglycan-associated lipoprotein 14
Peptidoglycan-binding protein ArfA 4
Photosystem I P700 chlorophyll a apoprotein A2 1
Probable lipoprotein YiaD 1
Putative lipoprotein YfiB 1
Sodium-type flagellar protein MotY 2
Trimeric autotransporter adhesin- and peptidoglycan-associated protein A 1

Protein length

Min length 172
Max length 572
Mean length (sd) 307.0 (229.5)
Median length 177.0

Protein length distribution