Orthogroup:group_335


Homologs in group_335

Help

8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10645 FBDBKF_10645 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_14980 EHELCC_14980 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_14810 NLDBIP_14810 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_14535 LHKJJB_14535 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_13155 HKOGLL_13155 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain
F4V73_RS14355 F4V73_RS14355 Morganella psychrotolerans - helix-turn-helix transcriptional regulator
PMI_RS08915 PMI_RS08915 Proteus mirabilis HI4320 - helix-turn-helix transcriptional regulator
PMI_RS10885 PMI_RS10885 Proteus mirabilis HI4320 - helix-turn-helix transcriptional regulator

Distribution of group_335 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_335 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_335

Orthogroup content: 8 members

Help

This page summarizes the annotation of all members of the orthologous group group_335.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hipB 5
2 - 3

Product

# Product Occurence
1 Transcriptional regulator, contains XRE-family HTH domain 5
2 helix-turn-helix transcriptional regulator 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 8 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 8 Helix-turn-helix

Annotations of the 21 SwissProt hits

Annotation Number of occurrences
Antitoxin PezA 1
HTH-type transcriptional regulator ImmR 1
HTH-type transcriptional regulator RamB 2
Putative HTH-type transcriptional regulatory protein MJ1164 1
Putative HTH-type transcriptional regulatory protein PAE1627 1
Putative HTH-type transcriptional regulatory protein PF1851 1
Putative HTH-type transcriptional regulatory protein PH1808 1
Putative HTH-type transcriptional regulatory protein PYRAB03670 1
Putative HTH-type transcriptional regulatory protein TK0539 1
Uncharacterized HTH-type transcriptional regulator AF_1793 1
Uncharacterized HTH-type transcriptional regulator MJ0272 1
Uncharacterized HTH-type transcriptional regulator R00410 1
Uncharacterized HTH-type transcriptional regulator RC0668 1
Uncharacterized HTH-type transcriptional regulator RP497 1
Uncharacterized HTH-type transcriptional regulator Smed_0045 1
Uncharacterized HTH-type transcriptional regulator YobD 1
Uncharacterized HTH-type transcriptional regulator y4aM 1
Uncharacterized HTH-type transcriptional regulator y4dJ 1
Uncharacterized HTH-type transcriptional regulator y4wC 1
Uncharacterized transcriptional regulator in ATPase CF(0) region 1

Protein length

Min length 97
Max length 103
Mean length (sd) 101.9 (2.2)
Median length 103.0

Protein length distribution