Orthogroup:group_314


Homologs in group_314

Help

8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09300 FBDBKF_09300 Morganella morganii S1 sctT type III secretion system export apparatus subunit SctT
EHELCC_10110 EHELCC_10110 Morganella morganii S2 sctT type III secretion system export apparatus subunit SctT
NLDBIP_10455 NLDBIP_10455 Morganella morganii S4 sctT type III secretion system export apparatus subunit SctT
LHKJJB_10900 LHKJJB_10900 Morganella morganii S3 sctT type III secretion system export apparatus subunit SctT
HKOGLL_13960 HKOGLL_13960 Morganella morganii S5 sctT type III secretion system export apparatus subunit SctT
F4V73_RS08345 F4V73_RS08345 Morganella psychrotolerans sctT type III secretion system export apparatus subunit SctT
F4V73_RS10665 F4V73_RS10665 Morganella psychrotolerans sctT type III secretion system export apparatus subunit SctT
PMI_RS13235 PMI_RS13235 Proteus mirabilis HI4320 sctT type III secretion system export apparatus subunit SctT

Distribution of group_314 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_314 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_314

Orthogroup content: 8 members

Help

This page summarizes the annotation of all members of the orthologous group group_314.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sctT 8

Product

# Product Occurence
1 type III secretion system export apparatus subunit SctT 8

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4791 8 U Intracellular trafficking, secretion, and vesicular transport (U) Type III secretory pathway, EscT/YscT component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K22509 6 type III secretion system export apparatus protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01311 8 Bacterial export proteins, family 1

Annotations of the 14 SwissProt hits

Annotation Number of occurrences
Flagellar biosynthetic protein FliR 7
Probable translocation protein y4yN 1
Secretion system apparatus protein SsaT 1
Surface presentation of antigens protein SpaR 3
Yop proteins translocation protein T 2

Protein length

Min length 253
Max length 261
Mean length (sd) 254.5 (3.0)
Median length 253.0

Protein length distribution