K04761


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K04761, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K04761
KO K04761
Description LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator

KO part of 1 pathways

Biofilm formation - Escherichia coli

KO part of 0 modules

Occurence in the database

K04761 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_347 PMI_RS16025 3561732 3562649 1 oxyR DNA-binding transcriptional regulator OxyR Proteus mirabilis HI4320
1 group_347 FBDBKF_12150 85443 86354 -1 oxyR DNA-binding transcriptional regulator OxyR Morganella morganii S1
2 group_347 EHELCC_14155 48351 49262 1 oxyR DNA-binding transcriptional regulator OxyR Morganella morganii S2
3 group_347 NLDBIP_15250 52288 53199 1 oxyR DNA-binding transcriptional regulator OxyR Morganella morganii S4
4 group_347 LHKJJB_15360 85443 86354 -1 oxyR DNA-binding transcriptional regulator OxyR Morganella morganii S3
5 group_347 HKOGLL_14480 72106 73017 -1 oxyR DNA-binding transcriptional regulator OxyR Morganella morganii S5
6 group_347 F4V73_RS16945 10699 11610 -1 oxyR DNA-binding transcriptional regulator OxyR Morganella psychrotolerans