Homologs in group_347

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12150 FBDBKF_12150 30.3 Morganella morganii S1 oxyR DNA-binding transcriptional regulator OxyR
EHELCC_14155 EHELCC_14155 30.3 Morganella morganii S2 oxyR DNA-binding transcriptional regulator OxyR
NLDBIP_15250 NLDBIP_15250 30.3 Morganella morganii S4 oxyR DNA-binding transcriptional regulator OxyR
LHKJJB_15360 LHKJJB_15360 30.3 Morganella morganii S3 oxyR DNA-binding transcriptional regulator OxyR
HKOGLL_14480 HKOGLL_14480 30.3 Morganella morganii S5 oxyR DNA-binding transcriptional regulator OxyR
F4V73_RS16945 F4V73_RS16945 29.2 Morganella psychrotolerans oxyR DNA-binding transcriptional regulator OxyR
PMI_RS16025 PMI_RS16025 29.9 Proteus mirabilis HI4320 oxyR DNA-binding transcriptional regulator OxyR

Distribution of the homologs in the orthogroup group_347

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_347

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39592 8.04e-24 101 23 5 296 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
Q9X725 1e-20 93 26 6 281 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P94403 1.05e-20 92 28 7 250 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
P71318 1.07e-20 93 29 4 213 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
P0ACQ4 8.86e-20 90 26 6 281 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 8.86e-20 90 26 6 281 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 8.86e-20 90 26 6 281 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
P44418 1.18e-19 90 25 8 294 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8X4M5 1.26e-19 90 24 7 289 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P27111 4.69e-19 88 26 5 244 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
P37499 5.58e-18 85 27 4 251 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
P77559 1.35e-16 81 24 4 250 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
Q08597 2.23e-14 75 25 4 243 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
Q04778 2.25e-14 75 25 8 281 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P44876 2.89e-14 75 23 5 243 3 HI_0775 Uncharacterized HTH-type transcriptional regulator HI_0775 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39647 3.35e-14 74 26 5 246 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
Q55459 4.43e-14 74 26 4 272 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q47005 5.7e-14 74 26 4 243 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
P52696 1.55e-13 73 22 4 292 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
P07774 3.8e-13 72 25 9 283 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P52667 5.02e-13 71 30 2 148 3 estR HTH-type transcriptional regulator EstR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P25544 3.15e-12 69 22 4 249 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
P52669 6.17e-12 68 26 4 246 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
O87883 2.04e-11 65 32 3 153 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
O34685 2.82e-11 66 25 8 230 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
O87324 9.95e-11 65 30 2 148 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium marinum
P55181 2.68e-10 63 28 2 147 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
O78432 9.18e-10 62 22 5 257 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
P52670 1.07e-09 61 27 1 146 3 ilvR HTH-type transcriptional regulator IlvR Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
O33945 1.56e-09 61 24 5 246 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
Q5N5I5 1.58e-09 61 20 1 240 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 1.58e-09 61 20 1 240 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P20668 2.24e-09 60 21 2 273 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P39127 2.44e-09 60 24 5 254 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P0ACR8 2.46e-09 60 20 3 246 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 2.46e-09 60 20 3 246 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P42722 2.63e-09 60 26 3 148 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P94387 3.43e-09 60 28 2 149 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
A2CI69 5.41e-09 59 25 4 219 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
Q47141 8.37e-09 58 28 5 167 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
Q3MCB5 1.21e-08 58 23 6 295 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
P52678 1.54e-08 58 25 6 283 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium leprae (strain TN)
P52665 1.68e-08 55 27 1 137 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
Q8YQ82 1.74e-08 58 23 6 295 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P52686 1.98e-08 58 26 4 173 3 sdsB SDS degradation transcriptional activation protein Pseudomonas sp. (strain ATCC 19151)
Q9X5P2 2.26e-08 57 26 2 139 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
B7NF72 2.53e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7LUJ5 2.57e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q329U3 2.6e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 2.6e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 2.6e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 2.6e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 2.6e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 2.6e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 2.6e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
P52666 2.68e-08 57 20 1 184 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
Q3YVK2 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 2.7e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q1R4H3 2.72e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 2.72e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 2.72e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 2.72e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 2.72e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
O07906 2.74e-08 57 22 1 145 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
B7NU32 2.85e-08 57 35 0 84 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
O68014 3.29e-08 57 22 7 300 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P70785 3.51e-08 57 23 6 247 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
O19892 3.8e-08 57 25 5 286 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
P03030 6.09e-08 56 22 4 225 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
B4TNR5 7.11e-08 56 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
B4SYF7 7.66e-08 56 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
B5FN59 7.73e-08 56 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
O33812 7.9e-08 55 25 1 133 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P0A2Q0 8.03e-08 55 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 8.03e-08 55 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 8.03e-08 55 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 8.03e-08 55 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 8.03e-08 55 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 8.03e-08 55 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 8.03e-08 55 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 8.03e-08 55 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
Q05840 8.1e-08 56 23 9 298 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
P51205 1.12e-07 55 21 7 297 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
Q6B936 1.18e-07 55 20 5 286 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
P73123 1.49e-07 55 22 5 286 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
B2TU26 1.55e-07 55 34 0 84 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
P52595 1.64e-07 55 20 2 238 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
P44821 2.02e-07 55 20 5 241 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P48271 2.37e-07 55 21 5 258 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
Q1XDT2 2.39e-07 54 21 7 297 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
Q47083 2.58e-07 54 22 4 230 1 cbl HTH-type transcriptional regulator cbl Escherichia coli (strain K12)
O35038 3.58e-07 54 24 2 129 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
O32255 3.64e-07 54 22 7 229 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
A1JI47 3.83e-07 53 33 1 96 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q00678 4.03e-07 53 22 3 243 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
Q9I6Z9 4.36e-07 53 26 2 150 3 bauR HTH-type transcriptional activator BauR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P74422 4.56e-07 53 23 4 225 3 ntcB Probable nitrogen assimilation transcriptional activator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P45105 5.47e-07 53 22 9 270 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P42427 6.18e-07 52 23 2 152 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P35112 1.02e-06 52 21 3 229 3 nocR Regulatory protein NocR Agrobacterium tumefaciens (strain T37)
P27102 2.2e-06 52 22 7 286 3 tcbR HTH-type transcriptional regulator TcbR Pseudomonas sp. (strain P51)
P76250 3.11e-06 51 35 1 91 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
P52691 3.99e-06 51 25 9 251 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
A0T0G2 4.7e-06 50 23 6 213 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
O34701 5.36e-06 50 25 4 152 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
P23841 1.35e-05 49 28 0 99 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
P96194 1.36e-05 47 32 0 93 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
Q4G384 1.45e-05 49 21 5 280 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
P52677 1.57e-05 49 28 3 161 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
P33634 1.9e-05 48 27 3 148 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
P05827 1.93e-05 48 24 2 148 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
P0A2Q2 1.95e-05 48 24 2 148 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 1.95e-05 48 24 2 148 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
Q57748 1.95e-05 48 22 9 292 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P0A9F3 2.2e-05 48 19 4 244 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 2.2e-05 48 19 4 244 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 2.2e-05 48 19 4 244 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
P67668 2.46e-05 48 23 6 211 3 BQ2027_MB2303C Uncharacterized HTH-type transcriptional regulator Mb2303c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMF3 2.46e-05 48 23 6 211 1 Rv2282c Uncharacterized HTH-type transcriptional regulator Rv2282c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF2 2.46e-05 48 23 6 211 3 MT2340 Uncharacterized HTH-type transcriptional regulator MT2340 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P52690 3.15e-05 48 23 1 146 3 cbbR HTH-type transcriptional regulator CbbR Cereibacter sphaeroides
B4E8S9 3.21e-05 48 20 6 238 1 ssuR HTH-type transcriptional regulator SsuR Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
P0A4T7 4.38e-05 48 23 4 155 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 4.38e-05 48 23 4 155 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
Q46M54 5.54e-05 47 32 0 71 1 tfdS HTH-type transcriptional regulator TfdS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q46M57 5.91e-05 47 32 0 71 1 tfdR HTH-type transcriptional regulator TdfR Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P49518 5.92e-05 47 20 7 302 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
P30864 7.64e-05 47 25 3 147 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
Q44311 7.65e-05 47 21 5 224 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
O34827 9.58e-05 47 22 1 145 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
B1JQ39 0.000116 46 30 0 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 0.000116 46 30 0 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 0.000116 46 30 0 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 0.000116 46 30 0 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 0.000116 46 30 0 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 0.000116 46 30 0 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 0.000116 46 30 0 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 0.000116 46 30 0 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 0.000116 46 30 0 75 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A0T0V5 0.000134 46 23 3 176 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
P46068 0.000164 46 30 7 143 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
P39376 0.000171 46 26 3 142 1 yjiE HTH-type transcriptional regulator YjiE Escherichia coli (strain K12)
O06703 0.000197 45 25 3 147 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q9HWH8 0.000214 45 20 6 247 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P77171 0.000311 45 26 4 151 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P77700 0.000334 45 23 6 222 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
P0A9G3 0.000353 45 23 3 172 3 nhaR Transcriptional activator protein NhaR Shigella flexneri
P0A9G2 0.000353 45 23 3 172 1 nhaR Transcriptional activator protein NhaR Escherichia coli (strain K12)
P20667 0.000411 45 22 9 292 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
P56885 0.000559 44 21 0 144 3 cbbR HTH-type transcriptional regulator CbbR Sinorhizobium medicae (strain WSM419)
Q85G62 0.000622 44 32 1 68 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11770
Feature type CDS
Gene -
Product LysR family transcriptional regulator
Location 2602202 - 2603101 (strand: -1)
Length 900 (nucleotides) / 299 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_347
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Protein Sequence

MRIDIKQLFYLIALDKTQHFGQAAEMCHVTQPTLSMRLRNLEKELDVVLIKRSSRFEGFTEEGEKILKWAKTMQSAYDGLQAEAANFRQQLFGQLRIGIVPLTNLNPMLMLQKISALFPEISFQVLSTNSENIIDRLNSNSLDIGICYLEKANTQQHEIYALKQTELGLLFHRNHFMPSTRTISWHEAVKQPLALLNKENHFRQSVDLAFQRYNLHPKVLVESSSTLHLIQSVNAGFCTSIVPIAKGMENLSQDLDVVPIVDATINAPLGIVIRKEEPRSILIEKCFAQMRTYLESTGL

Flanking regions ( +/- flanking 50bp)

GCAATATAAAAACAGATAACTATTCCCTTCACCTGCAAATGACGAGGTTATTGCGTATCGATATTAAACAGTTATTTTATTTAATCGCTTTGGATAAAACGCAACATTTTGGTCAAGCTGCCGAGATGTGCCATGTTACGCAACCTACCTTATCAATGCGATTACGTAATTTAGAAAAAGAGCTTGATGTGGTTCTTATCAAGCGTAGCTCTCGCTTTGAGGGATTTACCGAAGAAGGCGAGAAAATATTAAAATGGGCGAAAACTATGCAATCTGCTTACGATGGATTACAAGCAGAAGCCGCTAACTTTCGACAGCAACTATTTGGGCAACTGCGTATAGGTATTGTGCCTTTAACCAATTTAAATCCTATGCTGATGTTGCAGAAAATATCGGCACTATTCCCAGAGATAAGTTTTCAGGTGCTCTCAACGAATAGCGAAAATATTATAGATCGACTTAATAGTAATAGTCTTGATATTGGTATCTGCTATTTGGAAAAAGCGAATACTCAACAGCATGAAATTTATGCATTAAAACAAACGGAGTTAGGGCTTTTATTTCATCGCAATCACTTTATGCCTTCAACAAGAACTATCTCGTGGCATGAAGCGGTTAAACAACCATTGGCTTTATTAAATAAAGAGAATCACTTTAGGCAATCCGTGGATTTAGCTTTTCAGCGTTATAACTTACACCCCAAGGTGTTGGTCGAAAGTAGTTCTACATTACATCTTATACAATCAGTTAATGCAGGGTTTTGCACCTCGATTGTCCCTATTGCTAAAGGTATGGAAAATCTCAGCCAAGATCTAGATGTTGTACCTATTGTTGATGCAACCATTAATGCCCCATTGGGGATTGTGATCCGCAAAGAAGAGCCGCGCTCTATATTAATTGAAAAATGTTTTGCACAAATGCGTACTTACTTAGAAAGTACAGGTCTATAGATGGATAGAGATAAAAAGGCGAGTATTAATAAATAGCTCGCCTTTGTTTT