Orthogroup:group_3068



Homologs in group_3068

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18735 FBDBKF_18735 Morganella morganii S1 lexA LexA family transcriptional regulator
EHELCC_15310 EHELCC_15310 Morganella morganii S2 lexA LexA family transcriptional regulator
NLDBIP_15840 NLDBIP_15840 Morganella morganii S4 lexA LexA family transcriptional regulator
LHKJJB_16000 LHKJJB_16000 Morganella morganii S3 lexA LexA family transcriptional regulator
HKOGLL_15120 HKOGLL_15120 Morganella morganii S5 lexA LexA family transcriptional regulator
PMI_RS11985 PMI_RS11985 Proteus mirabilis HI4320 - LexA family transcriptional regulator

Distribution of group_3068 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3068 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3068

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3068.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lexA 5
2 - 1

Product

# Product Occurence
1 LexA family transcriptional regulator 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1974 6 KT Transcription (K)
Signal transduction mechanisms (T)
SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00717 6 Peptidase S24-like
PF01381 6 Helix-turn-helix

Annotations of the 92 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional regulator DicA 1
HTH-type transcriptional regulator PrtR 1
HTH-type transcriptional regulator RdgA 1
HTH-type transcriptional regulator Xre 1
HTH-type transcriptional regulator for conjugative element R391 1
HTH-type transcriptional regulator for conjugative element SXT 1
HTH-type transcriptional regulator for conjugative element pMERPH 1
LexA repressor 69
LexA repressor 1 4
LexA repressor 2 2
Prophage repressor CohE 1
Protein MucA 2
Regulatory protein cro 1
Repressor protein C 1
Repressor protein C2 1
Repressor protein CI 1
Repressor protein CI (Fragment) 1
Repressor protein cI 1
Uncharacterized HTH-type transcriptional regulator CBU_1416 1

Protein length

Min length 210
Max length 215
Mean length (sd) 210.8 (2.0)
Median length 210.0

Protein length distribution