Homologs in group_3065

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18510 FBDBKF_18510 65.3 Morganella morganii S1 rusA RusA family crossover junction endodeoxyribonuclease
EHELCC_01875 EHELCC_01875 65.3 Morganella morganii S2 rusA RusA family crossover junction endodeoxyribonuclease
NLDBIP_01585 NLDBIP_01585 65.3 Morganella morganii S4 rusA RusA family crossover junction endodeoxyribonuclease
LHKJJB_00450 LHKJJB_00450 65.3 Morganella morganii S3 rusA RusA family crossover junction endodeoxyribonuclease
HKOGLL_00490 HKOGLL_00490 65.3 Morganella morganii S5 rusA RusA family crossover junction endodeoxyribonuclease

Distribution of the homologs in the orthogroup group_3065

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3065

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02415
Feature type CDS
Gene -
Product RusA family crossover junction endodeoxyribonuclease
Location 541348 - 541704 (strand: 1)
Length 357 (nucleotides) / 118 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3065
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF05866 Endodeoxyribonuclease RusA

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4570 Replication, recombination and repair (L) L Holliday junction resolvase RusA (prophage-encoded endonuclease)

Protein Sequence

MKVFNIEPVPKPRMTQADKWKKRPPVLKYFAFKDEVKLNKITLPESHYHITFILPMPKSWSKTKRSEMNGKPHQQKPDKDNLEKALLDAIFDDDSRVWDGRVTKVWGKRGQIIIQEVR

Flanking regions ( +/- flanking 50bp)

GGTGTTTTGAGAACGCAAGCCATATTGATCCAAGAAGGGAAGTTGAACGTGTGAAGGTCTTTAATATCGAACCAGTACCTAAACCAAGGATGACTCAGGCTGATAAATGGAAAAAACGTCCCCCAGTTTTAAAGTATTTTGCGTTTAAGGACGAAGTAAAGTTAAACAAAATCACCCTACCTGAATCACATTACCACATTACATTCATTCTACCCATGCCGAAGAGTTGGAGTAAAACTAAACGCTCCGAAATGAACGGTAAACCCCATCAACAAAAACCGGATAAAGATAATCTCGAAAAAGCATTACTTGATGCTATTTTTGACGATGATTCACGTGTATGGGATGGGCGGGTAACAAAAGTGTGGGGAAAAAGGGGGCAGATAATTATCCAAGAGGTGCGATAGTGAATATTGAGTGGATACGCGAGCGAGTAAGTACAGCGTTGATGAATGTT