Homologs in group_3065

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18510 FBDBKF_18510 100.0 Morganella morganii S1 rusA RusA family crossover junction endodeoxyribonuclease
EHELCC_01875 EHELCC_01875 100.0 Morganella morganii S2 rusA RusA family crossover junction endodeoxyribonuclease
NLDBIP_01585 NLDBIP_01585 100.0 Morganella morganii S4 rusA RusA family crossover junction endodeoxyribonuclease
HKOGLL_00490 HKOGLL_00490 100.0 Morganella morganii S5 rusA RusA family crossover junction endodeoxyribonuclease
PMI_RS02415 PMI_RS02415 65.3 Proteus mirabilis HI4320 - RusA family crossover junction endodeoxyribonuclease

Distribution of the homologs in the orthogroup group_3065

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3065

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_00450
Feature type CDS
Gene rusA
Product RusA family crossover junction endodeoxyribonuclease
Location 76028 - 76423 (strand: 1)
Length 396 (nucleotides) / 131 (amino acids)

Contig

Accession ZDB_359
Length 392768 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3065
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF05866 Endodeoxyribonuclease RusA

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4570 Replication, recombination and repair (L) L Holliday junction resolvase RusA (prophage-encoded endonuclease)

Protein Sequence

MQVNEFDITPVPKPRMTKSDKWKKRPETARYWAFKDEVRLRGLTLPECGYHVIFTVPMPKSWSKKKRAAMNGQPHQQRPDKDNFEKALLDAVFGEDCRVWDGRASKLWGESGKITVRLPEKSTIHELITIR

Flanking regions ( +/- flanking 50bp)

GGCACGGATGCAGAAACTGTTTGATTCACTACTGAAAAAGGCCAGGAACAATGCAGGTTAACGAGTTCGATATCACGCCGGTACCAAAGCCGCGCATGACCAAAAGCGATAAATGGAAAAAGCGCCCTGAAACAGCACGCTACTGGGCGTTTAAAGATGAAGTCAGATTACGCGGATTAACGCTTCCTGAGTGCGGTTATCACGTCATTTTTACTGTACCCATGCCTAAATCGTGGAGTAAGAAAAAACGAGCCGCTATGAATGGGCAGCCGCACCAGCAGAGACCGGATAAGGATAACTTTGAAAAGGCGTTGTTAGATGCGGTATTTGGTGAGGATTGTCGAGTATGGGACGGCAGGGCATCAAAGCTTTGGGGTGAGTCCGGGAAGATAACGGTAAGGTTACCGGAAAAATCGACAATTCATGAACTTATTACCATCAGGTAAATAAGTGATTGAAATTGTTAATTGATAAATGAATAGGGTAAGAAATTATG