Orthogroup:group_2816



Homologs in group_2816

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09470 FBDBKF_09470 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_09940 EHELCC_09940 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_10285 NLDBIP_10285 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_11070 LHKJJB_11070 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_14130 HKOGLL_14130 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain
F4V73_RS10510 F4V73_RS10510 Morganella psychrotolerans - helix-turn-helix transcriptional regulator

Distribution of group_2816 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2816 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2816

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2816.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hipB 5
2 - 1

Product

# Product Occurence
1 Transcriptional regulator, contains XRE-family HTH domain 5
2 helix-turn-helix transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 6 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 6 Helix-turn-helix

Protein length

Min length 94
Max length 102
Mean length (sd) 100.7 (3.3)
Median length 102.0

Protein length distribution