Orthogroup:group_278


Homologs in group_278

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05810 FBDBKF_05810 Morganella morganii S1 sufS cysteine desulfurase SufS
EHELCC_11780 EHELCC_11780 Morganella morganii S2 sufS cysteine desulfurase SufS
NLDBIP_12120 NLDBIP_12120 Morganella morganii S4 sufS cysteine desulfurase SufS
LHKJJB_11980 LHKJJB_11980 Morganella morganii S3 sufS cysteine desulfurase SufS
HKOGLL_10595 HKOGLL_10595 Morganella morganii S5 sufS cysteine desulfurase SufS
F4V73_RS03515 F4V73_RS03515 Morganella psychrotolerans sufS cysteine desulfurase SufS
F4V73_RS16875 F4V73_RS16875 Morganella psychrotolerans - aminotransferase class V-fold PLP-dependent enzyme
PMI_RS06830 PMI_RS06830 Proteus mirabilis HI4320 sufS cysteine desulfurase SufS

Distribution of group_278 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_278 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_278

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_278.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sufS 7
2 - 1

Product

# Product Occurence
1 cysteine desulfurase SufS 7
2 aminotransferase class V-fold PLP-dependent enzyme 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0520 8 E Amino acid transport and metabolism (E) Selenocysteine lyase/Cysteine desulfurase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11717 7 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Selenocompound metabolism
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00266 8 Aminotransferase class-V

Annotations of the 362 SwissProt hits

Annotation Number of occurrences
Aminotransferase-like protein FGM3 1
Cysteine desulfurase 76
Cysteine desulfurase 1 1
Cysteine desulfurase 1, chloroplastic 1
Cysteine desulfurase 2 1
Cysteine desulfurase CsdA 1
Cysteine desulfurase IscS 161
Cysteine desulfurase IscS 1 1
Cysteine desulfurase IscS 2 1
Cysteine desulfurase NifS 1
Cysteine desulfurase SufS 3
Cysteine desulfurase, mitochondrial 7
Cysteine desulfurase, mitosomal 2
Cysteine desulfurase-like protein ustD 1
Histidinol-phosphate aminotransferase 3
IscS-like cysteine desulfurase 1
Iscs-like cysteine desulfurase 1
Isopenicillin N epimerase 2
L-cysteine desulfhydrase 1
Molybdenum cofactor sulfurase 25
Molybdenum cofactor sulfurase 1 2
Molybdenum cofactor sulfurase 2 2
Molybdenum cofactor sulfurase 3 1
NifS/IcsS protein homolog 1
Nonribosomal peptide synthetase-like enzyme fsqF 1
O-phospho-L-seryl-tRNA:Cys-tRNA synthase 2
Probable cysteine desulfurase 35
Probable cysteine desulfurase 1 1
Probable cysteine desulfurase 2 1
Probable cysteine desulfurase, mitochondrial 2
Probable glycine dehydrogenase (decarboxylating) subunit 1 1
Probable hercynylcysteine sulfoxide lyase 3
Putative L-cysteine desulfhydrase 1 1
Putative L-cysteine desulfhydrase 2 1
Putative csd-like protein HI_1343 1
Putative cysteine desulfurase IscS 1 1
Putative cysteine desulfurase IscS 2 1
Putative cysteine desulfurase NifS 2
Putative cysteine desulfurase PbSufS 1
Selenocysteine lyase 6
Uncharacterized aminotransferase C777.03c 1
Uncharacterized aminotransferase YcbU 1
Uncharacterized protein C11D3.10 1
Uncharacterized protein MT3887 1
Uncharacterized protein Rv3778c 1

Protein length

Min length 412
Max length 431
Mean length (sd) 414.5 (6.7)
Median length 412.0

Protein length distribution