Orthogroup:group_260


Homologs in group_260

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04475 FBDBKF_04475 Morganella morganii S1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
EHELCC_05765 EHELCC_05765 Morganella morganii S2 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
NLDBIP_06085 NLDBIP_06085 Morganella morganii S4 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
LHKJJB_02965 LHKJJB_02965 Morganella morganii S3 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
HKOGLL_06440 HKOGLL_06440 Morganella morganii S5 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
F4V73_RS08935 F4V73_RS08935 Morganella psychrotolerans - pirin family protein
PMI_RS10860 PMI_RS10860 Proteus mirabilis HI4320 - pirin family protein
PMI_RS17240 PMI_RS17240 Proteus mirabilis HI4320 - pirin family protein

Distribution of group_260 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_260 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_260

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_260.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yhaK 5
2 - 3

Product

# Product Occurence
1 Redox-sensitive bicupin YhaK, pirin superfamily 5
2 pirin family protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1741 8 R General function prediction only (R) Redox-sensitive bicupin YhaK, pirin superfamily

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06911 8 quercetin 2,3-dioxygenase [EC:1.13.11.24] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02678 8 Pirin
PF05726 8 Pirin C-terminal cupin domain

Annotations of the 25 SwissProt hits

Annotation Number of occurrences
Pirin 3
Pirin-1 1
Pirin-like protein 1
Pirin-like protein 2 1
Pirin-like protein At1g50590 1
Pirin-like protein CC_0481 1
Pirin-like protein CC_1473 1
Pirin-like protein CC_3178 1
Putative pirin-like protein At3g59260 1
Putative quercetin 2,3-dioxygenase MT0190 1
Putative quercetin 2,3-dioxygenase Mb0187c 1
Putative quercetin 2,3-dioxygenase PA1205 1
Putative quercetin 2,3-dioxygenase PA1210 1
Putative quercetin 2,3-dioxygenase PA2418 1
Putative quercetin 2,3-dioxygenase PA3240 1
Putative quercetin 2,3-dioxygenase PM1685 1
Putative quercetin 2,3-dioxygenase Rv0181c 1
Putative quercetin 2,3-dioxygenase Ta0133 1
Putative quercetin 2,3-dioxygenase VC_A0969 1
Putative quercetin 2,3-dioxygenase ZMO1337 1
Putative quercetin 2,3-dioxygenase sll1773 1
Quercetin 2,3-dioxygenase 2

Protein length

Min length 289
Max length 296
Mean length (sd) 292.6 (2.0)
Median length 293.0

Protein length distribution