K10558


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K10558, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K10558
KO K10558
Description AI-2 transport system ATP-binding protein

KO part of 2 pathways

ABC transporters
Quorum sensing

KO part of 0 modules

Occurence in the database

K10558 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2520 FBDBKF_02190 126811 128373 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S1
1 group_2520 EHELCC_02660 514631 516193 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S2
2 group_2520 NLDBIP_00800 163943 165505 1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S4
3 group_2520 LHKJJB_01235 227180 228742 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S3
4 group_2520 HKOGLL_01275 232691 234253 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S5
5 group_2520 F4V73_RS04560 963472 965049 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella psychrotolerans